Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC21.74■■□□□ 1.07
Rnf38Q8BI21 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.73■■□□□ 1.07
Rnf38Q8BI21 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21.73■■□□□ 1.07
Rnf38Q8BI21 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Rnf38Q8BI21 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rnf38Q8BI21 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Rnf38Q8BI21 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC21.73■■□□□ 1.07
Rnf38Q8BI21 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Rnf38Q8BI21 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rnf38Q8BI21 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Rnf38Q8BI21 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rnf38Q8BI21 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rnf38Q8BI21 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rnf38Q8BI21 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rnf38Q8BI21 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Rnf38Q8BI21 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Rnf38Q8BI21 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rnf38Q8BI21 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rnf38Q8BI21 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rnf38Q8BI21 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC21.7■■□□□ 1.06
Rnf38Q8BI21 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC21.7■■□□□ 1.06
Rnf38Q8BI21 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rnf38Q8BI21 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rnf38Q8BI21 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Rnf38Q8BI21 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC21.69■■□□□ 1.06
Rnf38Q8BI21 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rnf38Q8BI21 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rnf38Q8BI21 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Rnf38Q8BI21 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rnf38Q8BI21 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Rnf38Q8BI21 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.68■■□□□ 1.06
Rnf38Q8BI21 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rnf38Q8BI21 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Rnf38Q8BI21 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Rnf38Q8BI21 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rnf38Q8BI21 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rnf38Q8BI21 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Rnf38Q8BI21 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC21.66■■□□□ 1.06
Rnf38Q8BI21 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rnf38Q8BI21 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rnf38Q8BI21 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Rnf38Q8BI21 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rnf38Q8BI21 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Rnf38Q8BI21 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rnf38Q8BI21 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Rnf38Q8BI21 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.64■■□□□ 1.06
Rnf38Q8BI21 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Rnf38Q8BI21 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Rnf38Q8BI21 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Rnf38Q8BI21 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Rnf38Q8BI21 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rnf38Q8BI21 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rnf38Q8BI21 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rnf38Q8BI21 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rnf38Q8BI21 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Rnf38Q8BI21 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rnf38Q8BI21 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Rnf38Q8BI21 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rnf38Q8BI21 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Rnf38Q8BI21 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Rnf38Q8BI21 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Rnf38Q8BI21 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rnf38Q8BI21 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rnf38Q8BI21 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Rnf38Q8BI21 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rnf38Q8BI21 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Rnf38Q8BI21 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rnf38Q8BI21 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.59■■□□□ 1.05
Rnf38Q8BI21 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC21.58■■□□□ 1.05
Rnf38Q8BI21 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Rnf38Q8BI21 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
Rnf38Q8BI21 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rnf38Q8BI21 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rnf38Q8BI21 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC21.56■■□□□ 1.04
Rnf38Q8BI21 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Rnf38Q8BI21 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Rnf38Q8BI21 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Rnf38Q8BI21 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.56■■□□□ 1.04
Rnf38Q8BI21 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Rnf38Q8BI21 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rnf38Q8BI21 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rnf38Q8BI21 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rnf38Q8BI21 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Rnf38Q8BI21 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Rnf38Q8BI21 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Rnf38Q8BI21 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.54■■□□□ 1.04
Rnf38Q8BI21 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Rnf38Q8BI21 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Rnf38Q8BI21 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
Rnf38Q8BI21 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rnf38Q8BI21 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rnf38Q8BI21 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.03
Rnf38Q8BI21 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rnf38Q8BI21 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rnf38Q8BI21 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Rnf38Q8BI21 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rnf38Q8BI21 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.5■■□□□ 1.03
Rnf38Q8BI21 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rnf38Q8BI21 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Rnf38Q8BI21 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms