Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Ccdc116Q80X53 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
Ccdc116Q80X53 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Ccdc116Q80X53 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
Ccdc116Q80X53 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Ccdc116Q80X53 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
Ccdc116Q80X53 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC22.07■■□□□ 1.12
Ccdc116Q80X53 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Ccdc116Q80X53 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC22.06■■□□□ 1.12
Ccdc116Q80X53 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ccdc116Q80X53 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
Ccdc116Q80X53 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Ccdc116Q80X53 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ccdc116Q80X53 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ccdc116Q80X53 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ccdc116Q80X53 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Ccdc116Q80X53 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ccdc116Q80X53 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ccdc116Q80X53 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC22.05■■□□□ 1.12
Ccdc116Q80X53 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ccdc116Q80X53 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
Ccdc116Q80X53 Gm11599-201ENSMUST00000118720 878 ntBASIC22.04■■□□□ 1.12
Ccdc116Q80X53 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ccdc116Q80X53 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC22.03■■□□□ 1.12
Ccdc116Q80X53 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ccdc116Q80X53 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC22.03■■□□□ 1.12
Ccdc116Q80X53 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
Ccdc116Q80X53 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ccdc116Q80X53 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC22.02■■□□□ 1.12
Ccdc116Q80X53 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
Ccdc116Q80X53 Gm9812-201ENSMUST00000061934 968 ntBASIC22.02■■□□□ 1.12
Ccdc116Q80X53 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Ccdc116Q80X53 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC22.02■■□□□ 1.12
Ccdc116Q80X53 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Ccdc116Q80X53 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
Ccdc116Q80X53 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
Ccdc116Q80X53 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ccdc116Q80X53 Gm45364-201ENSMUST00000210883 159 ntBASIC22.01■■□□□ 1.11
Ccdc116Q80X53 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Ccdc116Q80X53 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC22■■□□□ 1.11
Ccdc116Q80X53 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC22■■□□□ 1.11
Ccdc116Q80X53 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Ccdc116Q80X53 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Ccdc116Q80X53 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC22■■□□□ 1.11
Ccdc116Q80X53 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Ccdc116Q80X53 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Ccdc116Q80X53 Mir3960-201ENSMUST00000198213 73 ntBASIC21.99■■□□□ 1.11
Ccdc116Q80X53 AC164433.2-201ENSMUST00000226346 1701 ntBASIC21.98■■□□□ 1.11
Ccdc116Q80X53 AC122317.2-201ENSMUST00000218708 1248 ntBASIC21.98■■□□□ 1.11
Ccdc116Q80X53 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Ccdc116Q80X53 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Ccdc116Q80X53 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
Ccdc116Q80X53 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ccdc116Q80X53 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
Ccdc116Q80X53 Gm12818-201ENSMUST00000117562 1349 ntBASIC21.97■■□□□ 1.11
Ccdc116Q80X53 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC21.97■■□□□ 1.11
Ccdc116Q80X53 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ccdc116Q80X53 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
Ccdc116Q80X53 AC154454.1-201ENSMUST00000225253 216 ntBASIC21.96■■□□□ 1.11
Ccdc116Q80X53 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ccdc116Q80X53 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ccdc116Q80X53 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ccdc116Q80X53 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ccdc116Q80X53 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Ccdc116Q80X53 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC21.95■■□□□ 1.1
Ccdc116Q80X53 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.95■■□□□ 1.1
Ccdc116Q80X53 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Ccdc116Q80X53 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
Ccdc116Q80X53 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC21.93■■□□□ 1.1
Ccdc116Q80X53 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC21.93■■□□□ 1.1
Ccdc116Q80X53 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Ccdc116Q80X53 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ccdc116Q80X53 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
Ccdc116Q80X53 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ccdc116Q80X53 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ccdc116Q80X53 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ccdc116Q80X53 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ccdc116Q80X53 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Ccdc116Q80X53 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ccdc116Q80X53 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ccdc116Q80X53 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ccdc116Q80X53 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
Ccdc116Q80X53 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.91■■□□□ 1.1
Ccdc116Q80X53 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
Ccdc116Q80X53 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ccdc116Q80X53 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Ccdc116Q80X53 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ccdc116Q80X53 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.9■■□□□ 1.1
Ccdc116Q80X53 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ccdc116Q80X53 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.9■■□□□ 1.1
Ccdc116Q80X53 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC21.9■■□□□ 1.1
Ccdc116Q80X53 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
Ccdc116Q80X53 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.9■■□□□ 1.1
Ccdc116Q80X53 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
Ccdc116Q80X53 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Ccdc116Q80X53 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Ccdc116Q80X53 AC153911.1-201ENSMUST00000220378 758 ntBASIC21.89■■□□□ 1.09
Ccdc116Q80X53 AC167019.3-201ENSMUST00000228225 1266 ntBASIC21.89■■□□□ 1.09
Ccdc116Q80X53 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Ccdc116Q80X53 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms