Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Prpf40bQ80W14 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Prpf40bQ80W14 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
Prpf40bQ80W14 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC25.96■■□□□ 1.75
Prpf40bQ80W14 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Prpf40bQ80W14 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC25.96■■□□□ 1.75
Prpf40bQ80W14 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC25.96■■□□□ 1.75
Prpf40bQ80W14 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Prpf40bQ80W14 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Prpf40bQ80W14 AC122428.3-201ENSMUST00000215551 2290 ntBASIC25.95■■□□□ 1.75
Prpf40bQ80W14 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Prpf40bQ80W14 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC25.95■■□□□ 1.74
Prpf40bQ80W14 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Prpf40bQ80W14 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC25.94■■□□□ 1.74
Prpf40bQ80W14 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC25.94■■□□□ 1.74
Prpf40bQ80W14 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC25.94■■□□□ 1.74
Prpf40bQ80W14 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Prpf40bQ80W14 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Prpf40bQ80W14 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
Prpf40bQ80W14 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC25.93■■□□□ 1.74
Prpf40bQ80W14 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC25.93■■□□□ 1.74
Prpf40bQ80W14 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC25.93■■□□□ 1.74
Prpf40bQ80W14 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
Prpf40bQ80W14 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
Prpf40bQ80W14 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC25.92■■□□□ 1.74
Prpf40bQ80W14 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC25.92■■□□□ 1.74
Prpf40bQ80W14 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Prpf40bQ80W14 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC25.91■■□□□ 1.74
Prpf40bQ80W14 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
Prpf40bQ80W14 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Prpf40bQ80W14 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Prpf40bQ80W14 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC25.9■■□□□ 1.74
Prpf40bQ80W14 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Prpf40bQ80W14 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Prpf40bQ80W14 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC25.89■■□□□ 1.73
Prpf40bQ80W14 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
Prpf40bQ80W14 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Prpf40bQ80W14 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Prpf40bQ80W14 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Prpf40bQ80W14 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC25.87■■□□□ 1.73
Prpf40bQ80W14 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC25.87■■□□□ 1.73
Prpf40bQ80W14 Gm45102-201ENSMUST00000207427 857 ntBASIC25.87■■□□□ 1.73
Prpf40bQ80W14 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC25.87■■□□□ 1.73
Prpf40bQ80W14 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC25.86■■□□□ 1.73
Prpf40bQ80W14 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
Prpf40bQ80W14 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Prpf40bQ80W14 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Prpf40bQ80W14 Gm14117-201ENSMUST00000122417 843 ntBASIC25.85■■□□□ 1.73
Prpf40bQ80W14 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC25.85■■□□□ 1.73
Prpf40bQ80W14 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Prpf40bQ80W14 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC25.84■■□□□ 1.73
Prpf40bQ80W14 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Prpf40bQ80W14 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Prpf40bQ80W14 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC25.83■■□□□ 1.73
Prpf40bQ80W14 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
Prpf40bQ80W14 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Prpf40bQ80W14 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC25.82■■□□□ 1.72
Prpf40bQ80W14 Gm13238-201ENSMUST00000117655 780 ntBASIC25.82■■□□□ 1.72
Prpf40bQ80W14 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC25.82■■□□□ 1.72
Prpf40bQ80W14 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC25.82■■□□□ 1.72
Prpf40bQ80W14 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
Prpf40bQ80W14 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC25.81■■□□□ 1.72
Prpf40bQ80W14 Terc-201ENSMUST00000082862 423 ntBASIC25.81■■□□□ 1.72
Prpf40bQ80W14 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
Prpf40bQ80W14 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Prpf40bQ80W14 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC25.8■■□□□ 1.72
Prpf40bQ80W14 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Prpf40bQ80W14 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
Prpf40bQ80W14 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Prpf40bQ80W14 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC25.79■■□□□ 1.72
Prpf40bQ80W14 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC25.79■■□□□ 1.72
Prpf40bQ80W14 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC25.79■■□□□ 1.72
Prpf40bQ80W14 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC25.78■■□□□ 1.72
Prpf40bQ80W14 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC25.78■■□□□ 1.72
Prpf40bQ80W14 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC25.78■■□□□ 1.72
Prpf40bQ80W14 AC153911.1-201ENSMUST00000220378 758 ntBASIC25.78■■□□□ 1.72
Prpf40bQ80W14 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Prpf40bQ80W14 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
Prpf40bQ80W14 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC25.77■■□□□ 1.72
Prpf40bQ80W14 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC25.77■■□□□ 1.72
Prpf40bQ80W14 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC25.77■■□□□ 1.72
Prpf40bQ80W14 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC25.77■■□□□ 1.72
Prpf40bQ80W14 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Prpf40bQ80W14 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Prpf40bQ80W14 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC25.76■■□□□ 1.71
Prpf40bQ80W14 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC25.76■■□□□ 1.71
Prpf40bQ80W14 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Prpf40bQ80W14 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC25.75■■□□□ 1.71
Prpf40bQ80W14 Gm43566-201ENSMUST00000196851 808 ntBASIC25.75■■□□□ 1.71
Prpf40bQ80W14 Nsd1-203ENSMUST00000224156 1149 ntBASIC25.75■■□□□ 1.71
Prpf40bQ80W14 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Prpf40bQ80W14 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Prpf40bQ80W14 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
Prpf40bQ80W14 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC25.74■■□□□ 1.71
Prpf40bQ80W14 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Prpf40bQ80W14 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
Prpf40bQ80W14 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Prpf40bQ80W14 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC25.73■■□□□ 1.71
Prpf40bQ80W14 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
Prpf40bQ80W14 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC25.73■■□□□ 1.71
Retrieved 100 of 76,532 protein–RNA pairs in 12.8 ms