Protein–RNA interactions for Protein: Q6A026

Pds5a, Sister chromatid cohesion protein PDS5 homolog A, mousemouse

Predictions only

Length 1,332 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pds5aQ6A026 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
Pds5aQ6A026 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC24.4■■□□□ 1.5
Pds5aQ6A026 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Pds5aQ6A026 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.49
Pds5aQ6A026 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Pds5aQ6A026 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
Pds5aQ6A026 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC24.38■■□□□ 1.49
Pds5aQ6A026 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Pds5aQ6A026 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Pds5aQ6A026 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Pds5aQ6A026 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Pds5aQ6A026 Gm27502-201ENSMUST00000183495 199 ntBASIC24.36■■□□□ 1.49
Pds5aQ6A026 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC24.36■■□□□ 1.49
Pds5aQ6A026 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
Pds5aQ6A026 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC24.35■■□□□ 1.49
Pds5aQ6A026 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
Pds5aQ6A026 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
Pds5aQ6A026 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Pds5aQ6A026 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC24.35■■□□□ 1.49
Pds5aQ6A026 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Pds5aQ6A026 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Pds5aQ6A026 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Pds5aQ6A026 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Pds5aQ6A026 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Pds5aQ6A026 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC24.33■■□□□ 1.48
Pds5aQ6A026 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC24.32■■□□□ 1.48
Pds5aQ6A026 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Pds5aQ6A026 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Pds5aQ6A026 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
Pds5aQ6A026 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Pds5aQ6A026 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC24.31■■□□□ 1.48
Pds5aQ6A026 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Pds5aQ6A026 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Pds5aQ6A026 Gm42699-201ENSMUST00000198104 1657 ntBASIC24.3■■□□□ 1.48
Pds5aQ6A026 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Pds5aQ6A026 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Pds5aQ6A026 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Pds5aQ6A026 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
Pds5aQ6A026 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Pds5aQ6A026 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Pds5aQ6A026 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
Pds5aQ6A026 Cap2-205ENSMUST00000225824 1634 ntBASIC24.29■■□□□ 1.48
Pds5aQ6A026 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Pds5aQ6A026 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Pds5aQ6A026 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC24.29■■□□□ 1.48
Pds5aQ6A026 Gm12366-201ENSMUST00000121722 873 ntBASIC24.29■■□□□ 1.48
Pds5aQ6A026 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC24.29■■□□□ 1.48
Pds5aQ6A026 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC24.29■■□□□ 1.48
Pds5aQ6A026 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Pds5aQ6A026 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Pds5aQ6A026 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC24.29■■□□□ 1.48
Pds5aQ6A026 Gm5786-201ENSMUST00000085368 882 ntBASIC24.29■■□□□ 1.48
Pds5aQ6A026 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Pds5aQ6A026 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
Pds5aQ6A026 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC24.28■■□□□ 1.48
Pds5aQ6A026 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Pds5aQ6A026 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Pds5aQ6A026 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Pds5aQ6A026 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Pds5aQ6A026 Gm44428-201ENSMUST00000204474 874 ntBASIC24.27■■□□□ 1.48
Pds5aQ6A026 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC24.27■■□□□ 1.48
Pds5aQ6A026 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC24.26■■□□□ 1.47
Pds5aQ6A026 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC24.26■■□□□ 1.47
Pds5aQ6A026 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Pds5aQ6A026 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
Pds5aQ6A026 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Pds5aQ6A026 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Pds5aQ6A026 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Pds5aQ6A026 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Pds5aQ6A026 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC24.25■■□□□ 1.47
Pds5aQ6A026 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Pds5aQ6A026 AC164433.2-201ENSMUST00000226346 1701 ntBASIC24.25■■□□□ 1.47
Pds5aQ6A026 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC24.24■■□□□ 1.47
Pds5aQ6A026 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Pds5aQ6A026 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Pds5aQ6A026 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Pds5aQ6A026 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Pds5aQ6A026 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC24.22■■□□□ 1.47
Pds5aQ6A026 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC24.22■■□□□ 1.47
Pds5aQ6A026 Gm14523-201ENSMUST00000117260 558 ntBASIC24.22■■□□□ 1.47
Pds5aQ6A026 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Pds5aQ6A026 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Pds5aQ6A026 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC24.21■■□□□ 1.47
Pds5aQ6A026 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
Pds5aQ6A026 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Pds5aQ6A026 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Pds5aQ6A026 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC24.21■■□□□ 1.47
Pds5aQ6A026 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Pds5aQ6A026 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC24.2■■□□□ 1.47
Pds5aQ6A026 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC24.2■■□□□ 1.46
Pds5aQ6A026 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC24.2■■□□□ 1.46
Pds5aQ6A026 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Pds5aQ6A026 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC24.2■■□□□ 1.46
Pds5aQ6A026 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Pds5aQ6A026 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Pds5aQ6A026 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC24.19■■□□□ 1.46
Pds5aQ6A026 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC24.19■■□□□ 1.46
Pds5aQ6A026 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Pds5aQ6A026 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC24.18■■□□□ 1.46
Pds5aQ6A026 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms