Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
AtmQ62388 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
AtmQ62388 Gm42501-201ENSMUST00000200220 1026 ntBASIC21.98■■□□□ 1.11
AtmQ62388 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
AtmQ62388 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
AtmQ62388 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC21.98■■□□□ 1.11
AtmQ62388 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.98■■□□□ 1.11
AtmQ62388 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
AtmQ62388 Gm21956-201ENSMUST00000179946 522 ntBASIC21.98■■□□□ 1.11
AtmQ62388 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
AtmQ62388 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
AtmQ62388 Slc35b2-207ENSMUST00000226086 850 ntBASIC21.97■■□□□ 1.11
AtmQ62388 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
AtmQ62388 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
AtmQ62388 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
AtmQ62388 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC21.96■■□□□ 1.11
AtmQ62388 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC21.96■■□□□ 1.11
AtmQ62388 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
AtmQ62388 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.96■■□□□ 1.11
AtmQ62388 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
AtmQ62388 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
AtmQ62388 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.1
AtmQ62388 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
AtmQ62388 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
AtmQ62388 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
AtmQ62388 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC21.94■■□□□ 1.1
AtmQ62388 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
AtmQ62388 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC21.94■■□□□ 1.1
AtmQ62388 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
AtmQ62388 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC21.93■■□□□ 1.1
AtmQ62388 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
AtmQ62388 AC153504.1-201ENSMUST00000218379 2290 ntBASIC21.93■■□□□ 1.1
AtmQ62388 Gm43592-201ENSMUST00000196922 1165 ntBASIC21.93■■□□□ 1.1
AtmQ62388 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
AtmQ62388 Gm43445-201ENSMUST00000198564 2091 ntBASIC21.92■■□□□ 1.1
AtmQ62388 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC21.92■■□□□ 1.1
AtmQ62388 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
AtmQ62388 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC21.91■■□□□ 1.1
AtmQ62388 Terc-201ENSMUST00000082862 423 ntBASIC21.91■■□□□ 1.1
AtmQ62388 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
AtmQ62388 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
AtmQ62388 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
AtmQ62388 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC21.91■■□□□ 1.1
AtmQ62388 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
AtmQ62388 Amer2-203ENSMUST00000225247 2662 ntBASIC21.9■■□□□ 1.1
AtmQ62388 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
AtmQ62388 Gm14121-201ENSMUST00000121441 1380 ntBASIC21.89■■□□□ 1.1
AtmQ62388 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
AtmQ62388 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
AtmQ62388 Zxda-201ENSMUST00000117281 2621 ntBASIC21.88■■□□□ 1.09
AtmQ62388 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21.88■■□□□ 1.09
AtmQ62388 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
AtmQ62388 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
AtmQ62388 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
AtmQ62388 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
AtmQ62388 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
AtmQ62388 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
AtmQ62388 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
AtmQ62388 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC21.85■■□□□ 1.09
AtmQ62388 Gm13241-201ENSMUST00000094493 780 ntBASIC21.85■■□□□ 1.09
AtmQ62388 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
AtmQ62388 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
AtmQ62388 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
AtmQ62388 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
AtmQ62388 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
AtmQ62388 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
AtmQ62388 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC21.83■■□□□ 1.09
AtmQ62388 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC21.83■■□□□ 1.08
AtmQ62388 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC21.82■■□□□ 1.08
AtmQ62388 Gm44428-201ENSMUST00000204474 874 ntBASIC21.82■■□□□ 1.08
AtmQ62388 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
AtmQ62388 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
AtmQ62388 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC21.82■■□□□ 1.08
AtmQ62388 Gm18755-201ENSMUST00000218030 1099 ntBASIC21.82■■□□□ 1.08
AtmQ62388 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
AtmQ62388 Gm43034-201ENSMUST00000198678 1364 ntBASIC21.82■■□□□ 1.08
AtmQ62388 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC21.81■■□□□ 1.08
AtmQ62388 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
AtmQ62388 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
AtmQ62388 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
AtmQ62388 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
AtmQ62388 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC21.81■■□□□ 1.08
AtmQ62388 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC21.81■■□□□ 1.08
AtmQ62388 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
AtmQ62388 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC21.8■■□□□ 1.08
AtmQ62388 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC21.8■■□□□ 1.08
AtmQ62388 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
AtmQ62388 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
AtmQ62388 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC21.78■■□□□ 1.08
AtmQ62388 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
AtmQ62388 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
AtmQ62388 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
AtmQ62388 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC21.78■■□□□ 1.08
AtmQ62388 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
AtmQ62388 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
AtmQ62388 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
AtmQ62388 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
AtmQ62388 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
AtmQ62388 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
AtmQ62388 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms