Protein–RNA interactions for Protein: Q61735

Cd47, Leukocyte surface antigen CD47, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd47Q61735 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cd47Q61735 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cd47Q61735 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cd47Q61735 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cd47Q61735 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cd47Q61735 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cd47Q61735 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cd47Q61735 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cd47Q61735 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Cd47Q61735 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cd47Q61735 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC20.35■□□□□ 0.85
Cd47Q61735 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cd47Q61735 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Cd47Q61735 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cd47Q61735 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cd47Q61735 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.34■□□□□ 0.85
Cd47Q61735 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Cd47Q61735 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.34■□□□□ 0.85
Cd47Q61735 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Cd47Q61735 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cd47Q61735 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cd47Q61735 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cd47Q61735 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.33■□□□□ 0.85
Cd47Q61735 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cd47Q61735 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cd47Q61735 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cd47Q61735 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cd47Q61735 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cd47Q61735 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cd47Q61735 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cd47Q61735 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cd47Q61735 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Cd47Q61735 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cd47Q61735 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
Cd47Q61735 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Cd47Q61735 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.31■□□□□ 0.84
Cd47Q61735 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cd47Q61735 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.31■□□□□ 0.84
Cd47Q61735 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cd47Q61735 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cd47Q61735 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.3■□□□□ 0.84
Cd47Q61735 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cd47Q61735 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Cd47Q61735 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Cd47Q61735 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Cd47Q61735 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.29■□□□□ 0.84
Cd47Q61735 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Cd47Q61735 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Cd47Q61735 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Cd47Q61735 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Cd47Q61735 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cd47Q61735 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cd47Q61735 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cd47Q61735 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Cd47Q61735 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cd47Q61735 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
Cd47Q61735 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
Cd47Q61735 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cd47Q61735 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Cd47Q61735 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cd47Q61735 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cd47Q61735 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cd47Q61735 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cd47Q61735 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cd47Q61735 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.25■□□□□ 0.83
Cd47Q61735 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cd47Q61735 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cd47Q61735 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Cd47Q61735 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cd47Q61735 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cd47Q61735 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cd47Q61735 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cd47Q61735 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Cd47Q61735 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Cd47Q61735 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Cd47Q61735 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Cd47Q61735 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.23■□□□□ 0.83
Cd47Q61735 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cd47Q61735 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cd47Q61735 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cd47Q61735 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.22■□□□□ 0.83
Cd47Q61735 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cd47Q61735 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cd47Q61735 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cd47Q61735 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cd47Q61735 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Cd47Q61735 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cd47Q61735 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.21■□□□□ 0.83
Cd47Q61735 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Cd47Q61735 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Cd47Q61735 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
Cd47Q61735 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cd47Q61735 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cd47Q61735 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cd47Q61735 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Cd47Q61735 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Cd47Q61735 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.2■□□□□ 0.82
Cd47Q61735 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.2■□□□□ 0.82
Cd47Q61735 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Cd47Q61735 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms