Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Foxc1Q61572 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Foxc1Q61572 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Foxc1Q61572 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC16.27■□□□□ 0.2
Foxc1Q61572 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Foxc1Q61572 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Foxc1Q61572 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Foxc1Q61572 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Foxc1Q61572 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC16.26■□□□□ 0.19
Foxc1Q61572 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Foxc1Q61572 AC153911.1-201ENSMUST00000220378 758 ntBASIC16.26■□□□□ 0.19
Foxc1Q61572 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Foxc1Q61572 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Foxc1Q61572 AC122428.3-201ENSMUST00000215551 2290 ntBASIC16.26■□□□□ 0.19
Foxc1Q61572 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Foxc1Q61572 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Foxc1Q61572 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Foxc1Q61572 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Foxc1Q61572 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Foxc1Q61572 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Foxc1Q61572 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Foxc1Q61572 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Foxc1Q61572 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Foxc1Q61572 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Foxc1Q61572 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC16.25■□□□□ 0.19
Foxc1Q61572 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Foxc1Q61572 Gm16437-201ENSMUST00000025669 507 ntBASIC16.25■□□□□ 0.19
Foxc1Q61572 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Foxc1Q61572 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Foxc1Q61572 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Foxc1Q61572 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Foxc1Q61572 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC16.24■□□□□ 0.19
Foxc1Q61572 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Foxc1Q61572 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Foxc1Q61572 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Foxc1Q61572 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
Foxc1Q61572 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Foxc1Q61572 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC16.23■□□□□ 0.19
Foxc1Q61572 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC16.23■□□□□ 0.19
Foxc1Q61572 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Foxc1Q61572 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC16.23■□□□□ 0.19
Foxc1Q61572 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Foxc1Q61572 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Foxc1Q61572 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Foxc1Q61572 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Foxc1Q61572 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Foxc1Q61572 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Foxc1Q61572 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Foxc1Q61572 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC16.21■□□□□ 0.19
Foxc1Q61572 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Foxc1Q61572 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Foxc1Q61572 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Foxc1Q61572 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Foxc1Q61572 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Foxc1Q61572 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Foxc1Q61572 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC16.2■□□□□ 0.18
Foxc1Q61572 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Foxc1Q61572 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Foxc1Q61572 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Foxc1Q61572 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Foxc1Q61572 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
Foxc1Q61572 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Foxc1Q61572 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Foxc1Q61572 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Foxc1Q61572 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC16.19■□□□□ 0.18
Foxc1Q61572 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Foxc1Q61572 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Foxc1Q61572 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Foxc1Q61572 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Foxc1Q61572 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Foxc1Q61572 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Foxc1Q61572 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Foxc1Q61572 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Foxc1Q61572 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Foxc1Q61572 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
Foxc1Q61572 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Foxc1Q61572 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Foxc1Q61572 Terc-201ENSMUST00000082862 423 ntBASIC16.17■□□□□ 0.18
Foxc1Q61572 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Foxc1Q61572 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Foxc1Q61572 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Foxc1Q61572 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Foxc1Q61572 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC16.16■□□□□ 0.18
Foxc1Q61572 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Foxc1Q61572 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Foxc1Q61572 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Foxc1Q61572 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Foxc1Q61572 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Foxc1Q61572 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Foxc1Q61572 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Foxc1Q61572 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Foxc1Q61572 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Foxc1Q61572 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Foxc1Q61572 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Foxc1Q61572 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Foxc1Q61572 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Foxc1Q61572 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Foxc1Q61572 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Foxc1Q61572 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Foxc1Q61572 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms