Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC24■■□□□ 1.43
Shroom1Q5SX79 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Shroom1Q5SX79 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Shroom1Q5SX79 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Shroom1Q5SX79 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Shroom1Q5SX79 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Shroom1Q5SX79 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Shroom1Q5SX79 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Shroom1Q5SX79 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Shroom1Q5SX79 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
Shroom1Q5SX79 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Shroom1Q5SX79 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
Shroom1Q5SX79 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Shroom1Q5SX79 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Shroom1Q5SX79 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC23.97■■□□□ 1.43
Shroom1Q5SX79 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Shroom1Q5SX79 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Shroom1Q5SX79 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Shroom1Q5SX79 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Shroom1Q5SX79 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Shroom1Q5SX79 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
Shroom1Q5SX79 Gm44428-201ENSMUST00000204474 874 ntBASIC23.96■■□□□ 1.43
Shroom1Q5SX79 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Shroom1Q5SX79 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Shroom1Q5SX79 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Shroom1Q5SX79 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC23.95■■□□□ 1.43
Shroom1Q5SX79 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
Shroom1Q5SX79 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC23.95■■□□□ 1.42
Shroom1Q5SX79 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Shroom1Q5SX79 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Shroom1Q5SX79 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.42
Shroom1Q5SX79 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Shroom1Q5SX79 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC23.94■■□□□ 1.42
Shroom1Q5SX79 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC23.94■■□□□ 1.42
Shroom1Q5SX79 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Shroom1Q5SX79 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Shroom1Q5SX79 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
Shroom1Q5SX79 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC23.93■■□□□ 1.42
Shroom1Q5SX79 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Shroom1Q5SX79 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Shroom1Q5SX79 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Shroom1Q5SX79 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Shroom1Q5SX79 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC23.92■■□□□ 1.42
Shroom1Q5SX79 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
Shroom1Q5SX79 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
Shroom1Q5SX79 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Shroom1Q5SX79 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
Shroom1Q5SX79 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
Shroom1Q5SX79 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Shroom1Q5SX79 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC23.91■■□□□ 1.42
Shroom1Q5SX79 Gm5921-201ENSMUST00000075898 882 ntBASIC23.91■■□□□ 1.42
Shroom1Q5SX79 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC23.9■■□□□ 1.42
Shroom1Q5SX79 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC23.89■■□□□ 1.41
Shroom1Q5SX79 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC23.89■■□□□ 1.41
Shroom1Q5SX79 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Shroom1Q5SX79 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC23.89■■□□□ 1.41
Shroom1Q5SX79 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Shroom1Q5SX79 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Shroom1Q5SX79 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Shroom1Q5SX79 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC23.88■■□□□ 1.41
Shroom1Q5SX79 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
Shroom1Q5SX79 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
Shroom1Q5SX79 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Shroom1Q5SX79 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Shroom1Q5SX79 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Shroom1Q5SX79 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Shroom1Q5SX79 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
Shroom1Q5SX79 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Shroom1Q5SX79 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Shroom1Q5SX79 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC23.85■■□□□ 1.41
Shroom1Q5SX79 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Shroom1Q5SX79 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
Shroom1Q5SX79 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Shroom1Q5SX79 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Shroom1Q5SX79 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
Shroom1Q5SX79 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Shroom1Q5SX79 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Shroom1Q5SX79 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC23.83■■□□□ 1.41
Shroom1Q5SX79 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
Shroom1Q5SX79 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Shroom1Q5SX79 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.4
Shroom1Q5SX79 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Shroom1Q5SX79 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Shroom1Q5SX79 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
Shroom1Q5SX79 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Shroom1Q5SX79 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Shroom1Q5SX79 Gm5812-201ENSMUST00000061073 957 ntBASIC23.81■■□□□ 1.4
Shroom1Q5SX79 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC23.81■■□□□ 1.4
Shroom1Q5SX79 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Shroom1Q5SX79 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Shroom1Q5SX79 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Shroom1Q5SX79 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC23.8■■□□□ 1.4
Shroom1Q5SX79 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Shroom1Q5SX79 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
Shroom1Q5SX79 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Shroom1Q5SX79 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Shroom1Q5SX79 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
Shroom1Q5SX79 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Shroom1Q5SX79 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Shroom1Q5SX79 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms