Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Trav6d-4Q5R1I0 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trav6d-4Q5R1I0 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trav6d-4Q5R1I0 Gm14523-201ENSMUST00000117260 558 ntBASIC19■□□□□ 0.63
Trav6d-4Q5R1I0 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Trav6d-4Q5R1I0 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trav6d-4Q5R1I0 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trav6d-4Q5R1I0 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Trav6d-4Q5R1I0 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trav6d-4Q5R1I0 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trav6d-4Q5R1I0 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trav6d-4Q5R1I0 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC18.98■□□□□ 0.63
Trav6d-4Q5R1I0 Gm44428-201ENSMUST00000204474 874 ntBASIC18.98■□□□□ 0.63
Trav6d-4Q5R1I0 AC153890.1-201ENSMUST00000220021 2469 ntBASIC18.98■□□□□ 0.63
Trav6d-4Q5R1I0 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trav6d-4Q5R1I0 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Trav6d-4Q5R1I0 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Trav6d-4Q5R1I0 Gm7332-201ENSMUST00000118351 454 ntBASIC18.97■□□□□ 0.63
Trav6d-4Q5R1I0 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Trav6d-4Q5R1I0 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC18.97■□□□□ 0.63
Trav6d-4Q5R1I0 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Trav6d-4Q5R1I0 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trav6d-4Q5R1I0 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trav6d-4Q5R1I0 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Trav6d-4Q5R1I0 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Trav6d-4Q5R1I0 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Trav6d-4Q5R1I0 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Trav6d-4Q5R1I0 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC18.94■□□□□ 0.62
Trav6d-4Q5R1I0 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Trav6d-4Q5R1I0 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trav6d-4Q5R1I0 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Trav6d-4Q5R1I0 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC18.93■□□□□ 0.62
Trav6d-4Q5R1I0 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trav6d-4Q5R1I0 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trav6d-4Q5R1I0 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Trav6d-4Q5R1I0 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC18.92■□□□□ 0.62
Trav6d-4Q5R1I0 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
Trav6d-4Q5R1I0 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Trav6d-4Q5R1I0 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trav6d-4Q5R1I0 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC18.91■□□□□ 0.62
Trav6d-4Q5R1I0 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC18.91■□□□□ 0.62
Trav6d-4Q5R1I0 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trav6d-4Q5R1I0 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC18.91■□□□□ 0.62
Trav6d-4Q5R1I0 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Trav6d-4Q5R1I0 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trav6d-4Q5R1I0 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC18.9■□□□□ 0.62
Trav6d-4Q5R1I0 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Trav6d-4Q5R1I0 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trav6d-4Q5R1I0 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC18.89■□□□□ 0.61
Trav6d-4Q5R1I0 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Trav6d-4Q5R1I0 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trav6d-4Q5R1I0 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav6d-4Q5R1I0 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav6d-4Q5R1I0 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav6d-4Q5R1I0 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC18.88■□□□□ 0.61
Trav6d-4Q5R1I0 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Trav6d-4Q5R1I0 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC18.88■□□□□ 0.61
Trav6d-4Q5R1I0 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav6d-4Q5R1I0 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav6d-4Q5R1I0 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav6d-4Q5R1I0 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC18.86■□□□□ 0.61
Trav6d-4Q5R1I0 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trav6d-4Q5R1I0 AC164433.2-201ENSMUST00000226346 1701 ntBASIC18.86■□□□□ 0.61
Trav6d-4Q5R1I0 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav6d-4Q5R1I0 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav6d-4Q5R1I0 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC18.85■□□□□ 0.61
Trav6d-4Q5R1I0 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav6d-4Q5R1I0 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav6d-4Q5R1I0 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Trav6d-4Q5R1I0 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav6d-4Q5R1I0 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav6d-4Q5R1I0 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Trav6d-4Q5R1I0 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trav6d-4Q5R1I0 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav6d-4Q5R1I0 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trav6d-4Q5R1I0 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trav6d-4Q5R1I0 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Trav6d-4Q5R1I0 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Trav6d-4Q5R1I0 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
Trav6d-4Q5R1I0 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Trav6d-4Q5R1I0 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trav6d-4Q5R1I0 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trav6d-4Q5R1I0 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trav6d-4Q5R1I0 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav6d-4Q5R1I0 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav6d-4Q5R1I0 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav6d-4Q5R1I0 AC117769.4-201ENSMUST00000225679 685 ntBASIC18.82■□□□□ 0.6
Trav6d-4Q5R1I0 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav6d-4Q5R1I0 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Trav6d-4Q5R1I0 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trav6d-4Q5R1I0 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Trav6d-4Q5R1I0 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trav6d-4Q5R1I0 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trav6d-4Q5R1I0 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC18.8■□□□□ 0.6
Trav6d-4Q5R1I0 Gm10420-201ENSMUST00000121713 882 ntBASIC18.8■□□□□ 0.6
Trav6d-4Q5R1I0 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trav6d-4Q5R1I0 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trav6d-4Q5R1I0 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trav6d-4Q5R1I0 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trav6d-4Q5R1I0 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 126.8 ms