Protein–RNA interactions for Protein: Q3V2J1

6430531B16Rik, RIKEN cDNA 6430531B16 gene, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
6430531B16RikQ3V2J1 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
6430531B16RikQ3V2J1 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
6430531B16RikQ3V2J1 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
6430531B16RikQ3V2J1 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC19.71■□□□□ 0.75
6430531B16RikQ3V2J1 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
6430531B16RikQ3V2J1 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
6430531B16RikQ3V2J1 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
6430531B16RikQ3V2J1 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
6430531B16RikQ3V2J1 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
6430531B16RikQ3V2J1 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
6430531B16RikQ3V2J1 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
6430531B16RikQ3V2J1 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
6430531B16RikQ3V2J1 Gm4799-201ENSMUST00000095396 657 ntBASIC19.68■□□□□ 0.74
6430531B16RikQ3V2J1 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
6430531B16RikQ3V2J1 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
6430531B16RikQ3V2J1 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
6430531B16RikQ3V2J1 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
6430531B16RikQ3V2J1 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
6430531B16RikQ3V2J1 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
6430531B16RikQ3V2J1 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
6430531B16RikQ3V2J1 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
6430531B16RikQ3V2J1 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
6430531B16RikQ3V2J1 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
6430531B16RikQ3V2J1 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
6430531B16RikQ3V2J1 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
6430531B16RikQ3V2J1 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
6430531B16RikQ3V2J1 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
6430531B16RikQ3V2J1 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
6430531B16RikQ3V2J1 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC19.66■□□□□ 0.74
6430531B16RikQ3V2J1 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.66■□□□□ 0.74
6430531B16RikQ3V2J1 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
6430531B16RikQ3V2J1 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
6430531B16RikQ3V2J1 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
6430531B16RikQ3V2J1 Gm9812-201ENSMUST00000061934 968 ntBASIC19.65■□□□□ 0.74
6430531B16RikQ3V2J1 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC19.65■□□□□ 0.74
6430531B16RikQ3V2J1 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
6430531B16RikQ3V2J1 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
6430531B16RikQ3V2J1 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
6430531B16RikQ3V2J1 Gm11599-201ENSMUST00000118720 878 ntBASIC19.64■□□□□ 0.73
6430531B16RikQ3V2J1 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC19.64■□□□□ 0.73
6430531B16RikQ3V2J1 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
6430531B16RikQ3V2J1 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
6430531B16RikQ3V2J1 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
6430531B16RikQ3V2J1 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
6430531B16RikQ3V2J1 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
6430531B16RikQ3V2J1 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
6430531B16RikQ3V2J1 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
6430531B16RikQ3V2J1 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
6430531B16RikQ3V2J1 Il17rd-202ENSMUST00000223942 2186 ntBASIC19.63■□□□□ 0.73
6430531B16RikQ3V2J1 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
6430531B16RikQ3V2J1 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
6430531B16RikQ3V2J1 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
6430531B16RikQ3V2J1 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
6430531B16RikQ3V2J1 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
6430531B16RikQ3V2J1 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
6430531B16RikQ3V2J1 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
6430531B16RikQ3V2J1 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
6430531B16RikQ3V2J1 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
6430531B16RikQ3V2J1 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
6430531B16RikQ3V2J1 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
6430531B16RikQ3V2J1 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
6430531B16RikQ3V2J1 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
6430531B16RikQ3V2J1 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.61■□□□□ 0.73
6430531B16RikQ3V2J1 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
6430531B16RikQ3V2J1 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
6430531B16RikQ3V2J1 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
6430531B16RikQ3V2J1 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
6430531B16RikQ3V2J1 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
6430531B16RikQ3V2J1 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
6430531B16RikQ3V2J1 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
6430531B16RikQ3V2J1 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
6430531B16RikQ3V2J1 Gm12818-201ENSMUST00000117562 1349 ntBASIC19.59■□□□□ 0.73
6430531B16RikQ3V2J1 AC153911.1-201ENSMUST00000220378 758 ntBASIC19.59■□□□□ 0.73
6430531B16RikQ3V2J1 AC154454.1-201ENSMUST00000225253 216 ntBASIC19.59■□□□□ 0.73
6430531B16RikQ3V2J1 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
6430531B16RikQ3V2J1 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
6430531B16RikQ3V2J1 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
6430531B16RikQ3V2J1 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
6430531B16RikQ3V2J1 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
6430531B16RikQ3V2J1 Mir3960-201ENSMUST00000198213 73 ntBASIC19.58■□□□□ 0.72
6430531B16RikQ3V2J1 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
6430531B16RikQ3V2J1 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
6430531B16RikQ3V2J1 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
6430531B16RikQ3V2J1 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
6430531B16RikQ3V2J1 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
6430531B16RikQ3V2J1 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
6430531B16RikQ3V2J1 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
6430531B16RikQ3V2J1 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
6430531B16RikQ3V2J1 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
6430531B16RikQ3V2J1 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
6430531B16RikQ3V2J1 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
6430531B16RikQ3V2J1 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
6430531B16RikQ3V2J1 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
6430531B16RikQ3V2J1 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
6430531B16RikQ3V2J1 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
6430531B16RikQ3V2J1 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC19.55■□□□□ 0.72
6430531B16RikQ3V2J1 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
6430531B16RikQ3V2J1 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
6430531B16RikQ3V2J1 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
6430531B16RikQ3V2J1 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 10.2 ms