Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Fam196aQ3USH1 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Fam196aQ3USH1 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Fam196aQ3USH1 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Fam196aQ3USH1 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
Fam196aQ3USH1 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Fam196aQ3USH1 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Fam196aQ3USH1 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC23.18■■□□□ 1.3
Fam196aQ3USH1 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Fam196aQ3USH1 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Fam196aQ3USH1 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Fam196aQ3USH1 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC23.17■■□□□ 1.3
Fam196aQ3USH1 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Fam196aQ3USH1 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
Fam196aQ3USH1 Gm10232-201ENSMUST00000089221 720 ntBASIC23.17■■□□□ 1.3
Fam196aQ3USH1 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Fam196aQ3USH1 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Fam196aQ3USH1 AC117769.4-201ENSMUST00000225679 685 ntBASIC23.16■■□□□ 1.3
Fam196aQ3USH1 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Fam196aQ3USH1 Gm14121-201ENSMUST00000121441 1380 ntBASIC23.15■■□□□ 1.3
Fam196aQ3USH1 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Fam196aQ3USH1 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Fam196aQ3USH1 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Fam196aQ3USH1 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC23.15■■□□□ 1.3
Fam196aQ3USH1 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC23.15■■□□□ 1.3
Fam196aQ3USH1 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
Fam196aQ3USH1 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Fam196aQ3USH1 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.29
Fam196aQ3USH1 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Fam196aQ3USH1 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
Fam196aQ3USH1 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Fam196aQ3USH1 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Fam196aQ3USH1 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Fam196aQ3USH1 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Fam196aQ3USH1 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC23.11■■□□□ 1.29
Fam196aQ3USH1 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC23.11■■□□□ 1.29
Fam196aQ3USH1 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Fam196aQ3USH1 Gm13241-201ENSMUST00000094493 780 ntBASIC23.11■■□□□ 1.29
Fam196aQ3USH1 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Fam196aQ3USH1 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
Fam196aQ3USH1 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Fam196aQ3USH1 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Fam196aQ3USH1 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Fam196aQ3USH1 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Fam196aQ3USH1 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC23.1■■□□□ 1.29
Fam196aQ3USH1 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Fam196aQ3USH1 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Fam196aQ3USH1 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Fam196aQ3USH1 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Fam196aQ3USH1 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC23.09■■□□□ 1.29
Fam196aQ3USH1 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Fam196aQ3USH1 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Fam196aQ3USH1 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Fam196aQ3USH1 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
Fam196aQ3USH1 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
Fam196aQ3USH1 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Fam196aQ3USH1 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Fam196aQ3USH1 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Fam196aQ3USH1 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC23.08■■□□□ 1.28
Fam196aQ3USH1 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Fam196aQ3USH1 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC23.07■■□□□ 1.28
Fam196aQ3USH1 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
Fam196aQ3USH1 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Fam196aQ3USH1 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Fam196aQ3USH1 Gm43034-201ENSMUST00000198678 1364 ntBASIC23.06■■□□□ 1.28
Fam196aQ3USH1 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC23.06■■□□□ 1.28
Fam196aQ3USH1 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
Fam196aQ3USH1 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
Fam196aQ3USH1 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC23.05■■□□□ 1.28
Fam196aQ3USH1 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
Fam196aQ3USH1 Zxda-201ENSMUST00000117281 2621 ntBASIC23.04■■□□□ 1.28
Fam196aQ3USH1 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Fam196aQ3USH1 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Fam196aQ3USH1 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Fam196aQ3USH1 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC23.03■■□□□ 1.28
Fam196aQ3USH1 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Fam196aQ3USH1 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Fam196aQ3USH1 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC23.02■■□□□ 1.28
Fam196aQ3USH1 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC23.02■■□□□ 1.28
Fam196aQ3USH1 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC23.02■■□□□ 1.28
Fam196aQ3USH1 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC23.02■■□□□ 1.28
Fam196aQ3USH1 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Fam196aQ3USH1 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC23.02■■□□□ 1.28
Fam196aQ3USH1 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Fam196aQ3USH1 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
Fam196aQ3USH1 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Fam196aQ3USH1 Gm37847-201ENSMUST00000192163 1497 ntBASIC23■■□□□ 1.27
Fam196aQ3USH1 Gm31748-201ENSMUST00000194938 1497 ntBASIC23■■□□□ 1.27
Fam196aQ3USH1 Gm5131-201ENSMUST00000212776 1238 ntBASIC23■■□□□ 1.27
Fam196aQ3USH1 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC22.99■■□□□ 1.27
Fam196aQ3USH1 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Fam196aQ3USH1 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC22.99■■□□□ 1.27
Fam196aQ3USH1 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Fam196aQ3USH1 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Fam196aQ3USH1 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Fam196aQ3USH1 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Fam196aQ3USH1 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Fam196aQ3USH1 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Fam196aQ3USH1 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
Fam196aQ3USH1 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms