Protein–RNA interactions for Protein: Q3U466

Cln6, Ceroid-lipofuscinosis, neuronal 6, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln6Q3U466 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC19.02■□□□□ 0.64
Cln6Q3U466 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Cln6Q3U466 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Cln6Q3U466 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cln6Q3U466 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cln6Q3U466 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Cln6Q3U466 Nkain2-201ENSMUST00000092602 558 ntBASIC19.02■□□□□ 0.64
Cln6Q3U466 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Cln6Q3U466 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cln6Q3U466 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cln6Q3U466 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC19.01■□□□□ 0.63
Cln6Q3U466 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cln6Q3U466 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Cln6Q3U466 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cln6Q3U466 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cln6Q3U466 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Cln6Q3U466 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
Cln6Q3U466 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cln6Q3U466 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Cln6Q3U466 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cln6Q3U466 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cln6Q3U466 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cln6Q3U466 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cln6Q3U466 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cln6Q3U466 Gm14121-201ENSMUST00000121441 1380 ntBASIC18.98■□□□□ 0.63
Cln6Q3U466 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Cln6Q3U466 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC18.98■□□□□ 0.63
Cln6Q3U466 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Cln6Q3U466 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
Cln6Q3U466 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Cln6Q3U466 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC18.97■□□□□ 0.63
Cln6Q3U466 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cln6Q3U466 Gm42699-201ENSMUST00000198104 1657 ntBASIC18.97■□□□□ 0.63
Cln6Q3U466 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Cln6Q3U466 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Cln6Q3U466 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cln6Q3U466 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Cln6Q3U466 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC18.96■□□□□ 0.63
Cln6Q3U466 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cln6Q3U466 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cln6Q3U466 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cln6Q3U466 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cln6Q3U466 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Cln6Q3U466 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cln6Q3U466 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cln6Q3U466 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cln6Q3U466 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Cln6Q3U466 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Cln6Q3U466 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cln6Q3U466 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cln6Q3U466 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cln6Q3U466 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Cln6Q3U466 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cln6Q3U466 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Cln6Q3U466 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Cln6Q3U466 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC18.93■□□□□ 0.62
Cln6Q3U466 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cln6Q3U466 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC18.93■□□□□ 0.62
Cln6Q3U466 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cln6Q3U466 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC18.93■□□□□ 0.62
Cln6Q3U466 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC18.93■□□□□ 0.62
Cln6Q3U466 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cln6Q3U466 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.93■□□□□ 0.62
Cln6Q3U466 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Cln6Q3U466 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
Cln6Q3U466 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC18.92■□□□□ 0.62
Cln6Q3U466 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cln6Q3U466 Gm4419-202ENSMUST00000226239 1431 ntBASIC18.91■□□□□ 0.62
Cln6Q3U466 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Cln6Q3U466 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Cln6Q3U466 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Cln6Q3U466 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Cln6Q3U466 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cln6Q3U466 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cln6Q3U466 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cln6Q3U466 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Cln6Q3U466 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Cln6Q3U466 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.9■□□□□ 0.62
Cln6Q3U466 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cln6Q3U466 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cln6Q3U466 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cln6Q3U466 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Cln6Q3U466 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cln6Q3U466 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cln6Q3U466 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC18.9■□□□□ 0.62
Cln6Q3U466 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cln6Q3U466 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Cln6Q3U466 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cln6Q3U466 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cln6Q3U466 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cln6Q3U466 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cln6Q3U466 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
Cln6Q3U466 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Cln6Q3U466 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Cln6Q3U466 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cln6Q3U466 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cln6Q3U466 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cln6Q3U466 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cln6Q3U466 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC18.87■□□□□ 0.61
Cln6Q3U466 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC18.87■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms