Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Khdc4Q3TCX3 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
Khdc4Q3TCX3 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Khdc4Q3TCX3 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.32■■□□□ 1
Khdc4Q3TCX3 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Khdc4Q3TCX3 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC21.31■■□□□ 1
Khdc4Q3TCX3 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.31■■□□□ 1
Khdc4Q3TCX3 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Khdc4Q3TCX3 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Khdc4Q3TCX3 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC21.3■■□□□ 1
Khdc4Q3TCX3 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Khdc4Q3TCX3 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.29■■□□□ 1
Khdc4Q3TCX3 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Khdc4Q3TCX3 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Khdc4Q3TCX3 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Khdc4Q3TCX3 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC21.29■■□□□ 1
Khdc4Q3TCX3 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Khdc4Q3TCX3 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Khdc4Q3TCX3 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.28■■□□□ 1
Khdc4Q3TCX3 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Khdc4Q3TCX3 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC21.27■■□□□ 1
Khdc4Q3TCX3 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC21.27■■□□□ 1
Khdc4Q3TCX3 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Khdc4Q3TCX3 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
Khdc4Q3TCX3 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Khdc4Q3TCX3 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Khdc4Q3TCX3 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Khdc4Q3TCX3 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Khdc4Q3TCX3 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Khdc4Q3TCX3 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Khdc4Q3TCX3 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC21.25■□□□□ 0.99
Khdc4Q3TCX3 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21.25■□□□□ 0.99
Khdc4Q3TCX3 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Khdc4Q3TCX3 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Khdc4Q3TCX3 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Khdc4Q3TCX3 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
Khdc4Q3TCX3 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Khdc4Q3TCX3 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Khdc4Q3TCX3 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Khdc4Q3TCX3 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Khdc4Q3TCX3 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Khdc4Q3TCX3 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Khdc4Q3TCX3 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Khdc4Q3TCX3 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Khdc4Q3TCX3 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Khdc4Q3TCX3 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Khdc4Q3TCX3 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Khdc4Q3TCX3 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Khdc4Q3TCX3 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC21.21■□□□□ 0.99
Khdc4Q3TCX3 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC21.21■□□□□ 0.99
Khdc4Q3TCX3 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Khdc4Q3TCX3 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Khdc4Q3TCX3 AC151971.4-201ENSMUST00000214717 704 ntBASIC21.21■□□□□ 0.99
Khdc4Q3TCX3 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC21.19■□□□□ 0.98
Khdc4Q3TCX3 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Khdc4Q3TCX3 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC21.19■□□□□ 0.98
Khdc4Q3TCX3 Gm5067-201ENSMUST00000170449 1009 ntBASIC21.19■□□□□ 0.98
Khdc4Q3TCX3 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC21.19■□□□□ 0.98
Khdc4Q3TCX3 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC21.19■□□□□ 0.98
Khdc4Q3TCX3 Terc-201ENSMUST00000082862 423 ntBASIC21.19■□□□□ 0.98
Khdc4Q3TCX3 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Khdc4Q3TCX3 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Khdc4Q3TCX3 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Khdc4Q3TCX3 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Khdc4Q3TCX3 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Khdc4Q3TCX3 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC21.18■□□□□ 0.98
Khdc4Q3TCX3 AC153911.1-201ENSMUST00000220378 758 ntBASIC21.18■□□□□ 0.98
Khdc4Q3TCX3 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
Khdc4Q3TCX3 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Khdc4Q3TCX3 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Khdc4Q3TCX3 Gm14121-201ENSMUST00000121441 1380 ntBASIC21.17■□□□□ 0.98
Khdc4Q3TCX3 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Khdc4Q3TCX3 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Khdc4Q3TCX3 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Khdc4Q3TCX3 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Khdc4Q3TCX3 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC21.16■□□□□ 0.98
Khdc4Q3TCX3 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Khdc4Q3TCX3 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Khdc4Q3TCX3 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Khdc4Q3TCX3 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Khdc4Q3TCX3 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Khdc4Q3TCX3 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Khdc4Q3TCX3 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Khdc4Q3TCX3 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Khdc4Q3TCX3 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Khdc4Q3TCX3 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Khdc4Q3TCX3 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Khdc4Q3TCX3 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21.14■□□□□ 0.97
Khdc4Q3TCX3 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
Khdc4Q3TCX3 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Khdc4Q3TCX3 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Khdc4Q3TCX3 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Khdc4Q3TCX3 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Khdc4Q3TCX3 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC21.13■□□□□ 0.97
Khdc4Q3TCX3 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
Khdc4Q3TCX3 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Khdc4Q3TCX3 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Khdc4Q3TCX3 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Khdc4Q3TCX3 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Khdc4Q3TCX3 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms