Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Nkx2-6P43688 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Nkx2-6P43688 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC21.38■■□□□ 1.01
Nkx2-6P43688 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.38■■□□□ 1.01
Nkx2-6P43688 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Nkx2-6P43688 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC21.37■■□□□ 1.01
Nkx2-6P43688 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Nkx2-6P43688 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Nkx2-6P43688 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.37■■□□□ 1.01
Nkx2-6P43688 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Nkx2-6P43688 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
Nkx2-6P43688 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Nkx2-6P43688 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Nkx2-6P43688 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Nkx2-6P43688 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Nkx2-6P43688 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Nkx2-6P43688 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC21.34■■□□□ 1.01
Nkx2-6P43688 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Nkx2-6P43688 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Nkx2-6P43688 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Nkx2-6P43688 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC21.33■■□□□ 1.01
Nkx2-6P43688 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Nkx2-6P43688 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Nkx2-6P43688 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
Nkx2-6P43688 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Nkx2-6P43688 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Nkx2-6P43688 Gm5812-201ENSMUST00000061073 957 ntBASIC21.31■■□□□ 1
Nkx2-6P43688 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Nkx2-6P43688 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Nkx2-6P43688 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.31■■□□□ 1
Nkx2-6P43688 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Nkx2-6P43688 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Nkx2-6P43688 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Nkx2-6P43688 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Nkx2-6P43688 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21.29■■□□□ 1
Nkx2-6P43688 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC21.29■■□□□ 1
Nkx2-6P43688 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.28■■□□□ 1
Nkx2-6P43688 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC21.28■■□□□ 1
Nkx2-6P43688 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Nkx2-6P43688 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC21.28■■□□□ 1
Nkx2-6P43688 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.28■■□□□ 1
Nkx2-6P43688 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Nkx2-6P43688 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Nkx2-6P43688 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
Nkx2-6P43688 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Nkx2-6P43688 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Nkx2-6P43688 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nkx2-6P43688 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Nkx2-6P43688 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC21.26■□□□□ 0.99
Nkx2-6P43688 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC21.26■□□□□ 0.99
Nkx2-6P43688 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Nkx2-6P43688 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Nkx2-6P43688 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nkx2-6P43688 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nkx2-6P43688 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.25■□□□□ 0.99
Nkx2-6P43688 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Nkx2-6P43688 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Nkx2-6P43688 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Nkx2-6P43688 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Nkx2-6P43688 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nkx2-6P43688 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Nkx2-6P43688 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Nkx2-6P43688 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nkx2-6P43688 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nkx2-6P43688 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC21.23■□□□□ 0.99
Nkx2-6P43688 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Nkx2-6P43688 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Nkx2-6P43688 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Nkx2-6P43688 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.22■□□□□ 0.99
Nkx2-6P43688 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Nkx2-6P43688 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Nkx2-6P43688 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC21.2■□□□□ 0.98
Nkx2-6P43688 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC21.2■□□□□ 0.98
Nkx2-6P43688 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Nkx2-6P43688 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Nkx2-6P43688 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.2■□□□□ 0.98
Nkx2-6P43688 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Nkx2-6P43688 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Nkx2-6P43688 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Nkx2-6P43688 Gm43592-201ENSMUST00000196922 1165 ntBASIC21.19■□□□□ 0.98
Nkx2-6P43688 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Nkx2-6P43688 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Nkx2-6P43688 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Nkx2-6P43688 AC117769.4-201ENSMUST00000225679 685 ntBASIC21.18■□□□□ 0.98
Nkx2-6P43688 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Nkx2-6P43688 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Nkx2-6P43688 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Nkx2-6P43688 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Nkx2-6P43688 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.18■□□□□ 0.98
Nkx2-6P43688 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Nkx2-6P43688 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Nkx2-6P43688 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nkx2-6P43688 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nkx2-6P43688 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nkx2-6P43688 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Nkx2-6P43688 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nkx2-6P43688 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Nkx2-6P43688 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Nkx2-6P43688 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Nkx2-6P43688 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms