Protein–RNA interactions for Protein: P09092

Hoxa6, Homeobox protein Hox-A6, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa6P09092 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC19.35■□□□□ 0.69
Hoxa6P09092 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC19.35■□□□□ 0.69
Hoxa6P09092 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Hoxa6P09092 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hoxa6P09092 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Hoxa6P09092 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hoxa6P09092 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hoxa6P09092 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hoxa6P09092 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Hoxa6P09092 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Hoxa6P09092 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Hoxa6P09092 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hoxa6P09092 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hoxa6P09092 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Hoxa6P09092 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hoxa6P09092 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hoxa6P09092 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Hoxa6P09092 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
Hoxa6P09092 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Hoxa6P09092 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Hoxa6P09092 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC19.31■□□□□ 0.68
Hoxa6P09092 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hoxa6P09092 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hoxa6P09092 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hoxa6P09092 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Hoxa6P09092 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hoxa6P09092 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hoxa6P09092 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hoxa6P09092 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hoxa6P09092 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hoxa6P09092 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC19.3■□□□□ 0.68
Hoxa6P09092 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Hoxa6P09092 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Hoxa6P09092 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC19.29■□□□□ 0.68
Hoxa6P09092 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.29■□□□□ 0.68
Hoxa6P09092 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC19.28■□□□□ 0.68
Hoxa6P09092 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Hoxa6P09092 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC19.28■□□□□ 0.68
Hoxa6P09092 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Hoxa6P09092 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hoxa6P09092 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hoxa6P09092 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hoxa6P09092 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Hoxa6P09092 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Hoxa6P09092 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC19.27■□□□□ 0.68
Hoxa6P09092 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Hoxa6P09092 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC19.26■□□□□ 0.67
Hoxa6P09092 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hoxa6P09092 AC117769.4-201ENSMUST00000225679 685 ntBASIC19.26■□□□□ 0.67
Hoxa6P09092 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hoxa6P09092 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Hoxa6P09092 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hoxa6P09092 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hoxa6P09092 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
Hoxa6P09092 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Hoxa6P09092 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hoxa6P09092 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Hoxa6P09092 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hoxa6P09092 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hoxa6P09092 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Hoxa6P09092 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hoxa6P09092 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hoxa6P09092 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hoxa6P09092 Gm5921-201ENSMUST00000075898 882 ntBASIC19.23■□□□□ 0.67
Hoxa6P09092 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Hoxa6P09092 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Hoxa6P09092 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hoxa6P09092 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Hoxa6P09092 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hoxa6P09092 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Hoxa6P09092 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hoxa6P09092 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hoxa6P09092 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hoxa6P09092 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hoxa6P09092 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hoxa6P09092 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Hoxa6P09092 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Hoxa6P09092 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hoxa6P09092 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Hoxa6P09092 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hoxa6P09092 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Hoxa6P09092 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.19■□□□□ 0.66
Hoxa6P09092 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hoxa6P09092 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hoxa6P09092 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC19.18■□□□□ 0.66
Hoxa6P09092 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hoxa6P09092 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Hoxa6P09092 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC19.17■□□□□ 0.66
Hoxa6P09092 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hoxa6P09092 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hoxa6P09092 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC19.16■□□□□ 0.66
Hoxa6P09092 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hoxa6P09092 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hoxa6P09092 Gm43592-201ENSMUST00000196922 1165 ntBASIC19.16■□□□□ 0.66
Hoxa6P09092 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hoxa6P09092 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Hoxa6P09092 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hoxa6P09092 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hoxa6P09092 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hoxa6P09092 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 70.6 ms