Protein–RNA interactions for Protein: O88627

Slc28a2, Sodium/nucleoside cotransporter 2, mousemouse

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc28a2O88627 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Slc28a2O88627 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
Slc28a2O88627 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Slc28a2O88627 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Slc28a2O88627 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Slc28a2O88627 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Slc28a2O88627 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
Slc28a2O88627 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Slc28a2O88627 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Slc28a2O88627 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Slc28a2O88627 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.76
Slc28a2O88627 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Slc28a2O88627 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Slc28a2O88627 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Slc28a2O88627 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Slc28a2O88627 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Slc28a2O88627 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC19.82■□□□□ 0.76
Slc28a2O88627 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Slc28a2O88627 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Slc28a2O88627 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Slc28a2O88627 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Slc28a2O88627 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Slc28a2O88627 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Slc28a2O88627 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Slc28a2O88627 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.79■□□□□ 0.76
Slc28a2O88627 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Slc28a2O88627 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Slc28a2O88627 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Slc28a2O88627 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Slc28a2O88627 Gm37136-201ENSMUST00000194368 194 ntBASIC19.79■□□□□ 0.76
Slc28a2O88627 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Slc28a2O88627 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Slc28a2O88627 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
Slc28a2O88627 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Slc28a2O88627 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Slc28a2O88627 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Slc28a2O88627 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC19.78■□□□□ 0.76
Slc28a2O88627 AC131739.1-201ENSMUST00000221692 1245 ntBASIC19.78■□□□□ 0.76
Slc28a2O88627 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Slc28a2O88627 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Slc28a2O88627 Gm14121-201ENSMUST00000121441 1380 ntBASIC19.78■□□□□ 0.76
Slc28a2O88627 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Slc28a2O88627 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Slc28a2O88627 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC19.77■□□□□ 0.76
Slc28a2O88627 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Slc28a2O88627 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
Slc28a2O88627 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.76■□□□□ 0.75
Slc28a2O88627 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC19.76■□□□□ 0.75
Slc28a2O88627 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Slc28a2O88627 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Slc28a2O88627 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
Slc28a2O88627 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.76■□□□□ 0.75
Slc28a2O88627 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Slc28a2O88627 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Slc28a2O88627 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Slc28a2O88627 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
Slc28a2O88627 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Slc28a2O88627 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Slc28a2O88627 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Slc28a2O88627 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Slc28a2O88627 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Slc28a2O88627 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Slc28a2O88627 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Slc28a2O88627 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Slc28a2O88627 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Slc28a2O88627 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Slc28a2O88627 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Slc28a2O88627 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Slc28a2O88627 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Slc28a2O88627 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Slc28a2O88627 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Slc28a2O88627 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Slc28a2O88627 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Slc28a2O88627 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Slc28a2O88627 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Slc28a2O88627 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Slc28a2O88627 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slc28a2O88627 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slc28a2O88627 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Slc28a2O88627 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC19.71■□□□□ 0.75
Slc28a2O88627 Gm7432-201ENSMUST00000210343 879 ntBASIC19.71■□□□□ 0.75
Slc28a2O88627 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.71■□□□□ 0.75
Slc28a2O88627 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Slc28a2O88627 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slc28a2O88627 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slc28a2O88627 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Slc28a2O88627 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Slc28a2O88627 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Slc28a2O88627 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Slc28a2O88627 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Slc28a2O88627 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Slc28a2O88627 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Slc28a2O88627 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Slc28a2O88627 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC19.69■□□□□ 0.74
Slc28a2O88627 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Slc28a2O88627 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Slc28a2O88627 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Slc28a2O88627 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Slc28a2O88627 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Slc28a2O88627 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms