Protein–RNA interactions for Protein: O70237

Gfi1b, Zinc finger protein Gfi-1b, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfi1bO70237 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Gfi1bO70237 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gfi1bO70237 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Gfi1bO70237 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Gfi1bO70237 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gfi1bO70237 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
Gfi1bO70237 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Gfi1bO70237 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Gfi1bO70237 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC18.67■□□□□ 0.58
Gfi1bO70237 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gfi1bO70237 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC18.66■□□□□ 0.58
Gfi1bO70237 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gfi1bO70237 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gfi1bO70237 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gfi1bO70237 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gfi1bO70237 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gfi1bO70237 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gfi1bO70237 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Gfi1bO70237 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC18.65■□□□□ 0.58
Gfi1bO70237 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gfi1bO70237 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Gfi1bO70237 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC18.64■□□□□ 0.57
Gfi1bO70237 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Gfi1bO70237 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gfi1bO70237 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Gfi1bO70237 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Gfi1bO70237 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Gfi1bO70237 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Gfi1bO70237 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Gfi1bO70237 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gfi1bO70237 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gfi1bO70237 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gfi1bO70237 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gfi1bO70237 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gfi1bO70237 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gfi1bO70237 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC18.62■□□□□ 0.57
Gfi1bO70237 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gfi1bO70237 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gfi1bO70237 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Gfi1bO70237 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gfi1bO70237 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC18.61■□□□□ 0.57
Gfi1bO70237 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC18.61■□□□□ 0.57
Gfi1bO70237 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gfi1bO70237 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC18.6■□□□□ 0.57
Gfi1bO70237 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gfi1bO70237 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gfi1bO70237 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gfi1bO70237 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC18.6■□□□□ 0.57
Gfi1bO70237 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gfi1bO70237 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gfi1bO70237 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Gfi1bO70237 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gfi1bO70237 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gfi1bO70237 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gfi1bO70237 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gfi1bO70237 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gfi1bO70237 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Gfi1bO70237 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Gfi1bO70237 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Gfi1bO70237 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gfi1bO70237 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gfi1bO70237 Gm26766-202ENSMUST00000227544 2347 ntBASIC18.57■□□□□ 0.56
Gfi1bO70237 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Gfi1bO70237 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gfi1bO70237 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Gfi1bO70237 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gfi1bO70237 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gfi1bO70237 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gfi1bO70237 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gfi1bO70237 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gfi1bO70237 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Gfi1bO70237 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gfi1bO70237 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gfi1bO70237 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Gfi1bO70237 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Gfi1bO70237 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Gfi1bO70237 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC18.55■□□□□ 0.56
Gfi1bO70237 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gfi1bO70237 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gfi1bO70237 Gm6934-201ENSMUST00000194780 1905 ntBASIC18.54■□□□□ 0.56
Gfi1bO70237 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Gfi1bO70237 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gfi1bO70237 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gfi1bO70237 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.53■□□□□ 0.56
Gfi1bO70237 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gfi1bO70237 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gfi1bO70237 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC18.53■□□□□ 0.56
Gfi1bO70237 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gfi1bO70237 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gfi1bO70237 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gfi1bO70237 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gfi1bO70237 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Gfi1bO70237 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gfi1bO70237 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gfi1bO70237 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gfi1bO70237 Gm9939-201ENSMUST00000067161 1154 ntBASIC18.52■□□□□ 0.56
Gfi1bO70237 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Gfi1bO70237 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.55
Gfi1bO70237 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gfi1bO70237 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms