Protein–RNA interactions for Protein: O54908

Dkk1, Dickkopf-related protein 1, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dkk1O54908 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Dkk1O54908 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Dkk1O54908 4931428L18Rik-202ENSMUST00000135245 889 ntAPPRIS P5 TSL 1 (best) BASIC19.39■□□□□ 0.69
Dkk1O54908 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Dkk1O54908 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Dkk1O54908 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Dkk1O54908 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Dkk1O54908 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Dkk1O54908 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Dkk1O54908 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Dkk1O54908 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Dkk1O54908 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC19.37■□□□□ 0.69
Dkk1O54908 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Dkk1O54908 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Dkk1O54908 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Dkk1O54908 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Dkk1O54908 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
Dkk1O54908 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Dkk1O54908 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC19.37■□□□□ 0.69
Dkk1O54908 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Dkk1O54908 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Dkk1O54908 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Dkk1O54908 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Dkk1O54908 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Dkk1O54908 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Dkk1O54908 Gm16437-201ENSMUST00000025669 507 ntBASIC19.35■□□□□ 0.69
Dkk1O54908 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Dkk1O54908 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
Dkk1O54908 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Dkk1O54908 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Dkk1O54908 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Dkk1O54908 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Dkk1O54908 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Dkk1O54908 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Dkk1O54908 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC19.33■□□□□ 0.68
Dkk1O54908 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC19.33■□□□□ 0.68
Dkk1O54908 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Dkk1O54908 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Dkk1O54908 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Dkk1O54908 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC19.33■□□□□ 0.68
Dkk1O54908 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Dkk1O54908 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Dkk1O54908 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Dkk1O54908 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Dkk1O54908 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Dkk1O54908 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Dkk1O54908 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Dkk1O54908 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC19.32■□□□□ 0.68
Dkk1O54908 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Dkk1O54908 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Dkk1O54908 Gm11687-201ENSMUST00000118911 886 ntBASIC19.31■□□□□ 0.68
Dkk1O54908 Il4-203ENSMUST00000140684 530 ntTSL 2 BASIC19.31■□□□□ 0.68
Dkk1O54908 Il4-204ENSMUST00000150568 605 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Dkk1O54908 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Dkk1O54908 Il4-201ENSMUST00000000889 590 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Dkk1O54908 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Dkk1O54908 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC19.31■□□□□ 0.68
Dkk1O54908 AC164433.2-201ENSMUST00000226346 1701 ntBASIC19.31■□□□□ 0.68
Dkk1O54908 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC19.31■□□□□ 0.68
Dkk1O54908 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Dkk1O54908 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Dkk1O54908 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Dkk1O54908 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Dkk1O54908 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC19.29■□□□□ 0.68
Dkk1O54908 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Dkk1O54908 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Dkk1O54908 Mir6538-201ENSMUST00000183713 110 ntBASIC19.29■□□□□ 0.68
Dkk1O54908 Olfr793-ps1-201ENSMUST00000205161 895 ntBASIC19.29■□□□□ 0.68
Dkk1O54908 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Dkk1O54908 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Dkk1O54908 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Dkk1O54908 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Dkk1O54908 AC151971.4-201ENSMUST00000214717 704 ntBASIC19.28■□□□□ 0.68
Dkk1O54908 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Dkk1O54908 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Dkk1O54908 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Dkk1O54908 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Dkk1O54908 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Dkk1O54908 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Dkk1O54908 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Dkk1O54908 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Dkk1O54908 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Dkk1O54908 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC19.26■□□□□ 0.67
Dkk1O54908 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Dkk1O54908 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Dkk1O54908 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC19.25■□□□□ 0.67
Dkk1O54908 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Dkk1O54908 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Dkk1O54908 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Dkk1O54908 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Dkk1O54908 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC19.24■□□□□ 0.67
Dkk1O54908 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC19.24■□□□□ 0.67
Dkk1O54908 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Dkk1O54908 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC19.23■□□□□ 0.67
Dkk1O54908 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Dkk1O54908 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Dkk1O54908 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC19.22■□□□□ 0.67
Dkk1O54908 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Dkk1O54908 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Dkk1O54908 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms