Protein–RNA interactions for Protein: O35350

Capn1, Calpain-1 catalytic subunit, mousemouse

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capn1O35350 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Capn1O35350 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
Capn1O35350 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.68■□□□□ 0.9
Capn1O35350 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Capn1O35350 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Capn1O35350 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Capn1O35350 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Capn1O35350 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.66■□□□□ 0.9
Capn1O35350 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Capn1O35350 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Capn1O35350 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Capn1O35350 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Capn1O35350 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
Capn1O35350 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Capn1O35350 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.65■□□□□ 0.9
Capn1O35350 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Capn1O35350 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.65■□□□□ 0.9
Capn1O35350 AC153911.1-201ENSMUST00000220378 758 ntBASIC20.65■□□□□ 0.9
Capn1O35350 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Capn1O35350 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Capn1O35350 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Capn1O35350 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Capn1O35350 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Capn1O35350 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Capn1O35350 Terc-201ENSMUST00000082862 423 ntBASIC20.62■□□□□ 0.89
Capn1O35350 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Capn1O35350 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Capn1O35350 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
Capn1O35350 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Capn1O35350 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Capn1O35350 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Capn1O35350 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Capn1O35350 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Capn1O35350 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.61■□□□□ 0.89
Capn1O35350 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Capn1O35350 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC20.6■□□□□ 0.89
Capn1O35350 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Capn1O35350 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Capn1O35350 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Capn1O35350 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Capn1O35350 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Capn1O35350 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Capn1O35350 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Capn1O35350 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Capn1O35350 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Capn1O35350 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Capn1O35350 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Capn1O35350 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Capn1O35350 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC20.58■□□□□ 0.89
Capn1O35350 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Capn1O35350 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Capn1O35350 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Capn1O35350 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Capn1O35350 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.57■□□□□ 0.88
Capn1O35350 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Capn1O35350 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.56■□□□□ 0.88
Capn1O35350 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Capn1O35350 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.56■□□□□ 0.88
Capn1O35350 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Capn1O35350 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Capn1O35350 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Capn1O35350 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Capn1O35350 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC20.55■□□□□ 0.88
Capn1O35350 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.55■□□□□ 0.88
Capn1O35350 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20.55■□□□□ 0.88
Capn1O35350 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Capn1O35350 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Capn1O35350 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Capn1O35350 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Capn1O35350 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Capn1O35350 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.54■□□□□ 0.88
Capn1O35350 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Capn1O35350 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.54■□□□□ 0.88
Capn1O35350 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Capn1O35350 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.54■□□□□ 0.88
Capn1O35350 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Capn1O35350 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Capn1O35350 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Capn1O35350 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Capn1O35350 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Capn1O35350 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Capn1O35350 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.88
Capn1O35350 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Capn1O35350 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Capn1O35350 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Capn1O35350 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Capn1O35350 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Capn1O35350 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Capn1O35350 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Capn1O35350 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Capn1O35350 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Capn1O35350 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Capn1O35350 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Capn1O35350 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Capn1O35350 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Capn1O35350 Gm5067-201ENSMUST00000170449 1009 ntBASIC20.49■□□□□ 0.87
Capn1O35350 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Capn1O35350 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Capn1O35350 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Capn1O35350 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms