Protein–RNA interactions for Protein: O08602

Raet1a, Retinoic acid early-inducible protein 1-alpha, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1aO08602 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC19.92■□□□□ 0.78
Raet1aO08602 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Raet1aO08602 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Raet1aO08602 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Raet1aO08602 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Raet1aO08602 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Raet1aO08602 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC19.9■□□□□ 0.78
Raet1aO08602 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.9■□□□□ 0.78
Raet1aO08602 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Raet1aO08602 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Raet1aO08602 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.78
Raet1aO08602 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Raet1aO08602 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC19.89■□□□□ 0.77
Raet1aO08602 Pkd1-207ENSMUST00000228550 1050 ntBASIC19.89■□□□□ 0.77
Raet1aO08602 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Raet1aO08602 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Raet1aO08602 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Raet1aO08602 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC19.88■□□□□ 0.77
Raet1aO08602 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Raet1aO08602 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Raet1aO08602 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Raet1aO08602 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Raet1aO08602 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Raet1aO08602 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC19.86■□□□□ 0.77
Raet1aO08602 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC19.86■□□□□ 0.77
Raet1aO08602 Terc-201ENSMUST00000082862 423 ntBASIC19.86■□□□□ 0.77
Raet1aO08602 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Raet1aO08602 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Raet1aO08602 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Raet1aO08602 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Raet1aO08602 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Raet1aO08602 Gm6311-201ENSMUST00000073790 878 ntBASIC19.85■□□□□ 0.77
Raet1aO08602 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Raet1aO08602 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC19.85■□□□□ 0.77
Raet1aO08602 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC19.84■□□□□ 0.77
Raet1aO08602 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Raet1aO08602 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Raet1aO08602 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC19.84■□□□□ 0.77
Raet1aO08602 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Raet1aO08602 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Raet1aO08602 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Raet1aO08602 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Raet1aO08602 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC19.83■□□□□ 0.77
Raet1aO08602 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Raet1aO08602 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Raet1aO08602 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Raet1aO08602 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Raet1aO08602 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Raet1aO08602 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Raet1aO08602 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC19.82■□□□□ 0.76
Raet1aO08602 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Raet1aO08602 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Raet1aO08602 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Raet1aO08602 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Raet1aO08602 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Raet1aO08602 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Raet1aO08602 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Raet1aO08602 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Raet1aO08602 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC19.8■□□□□ 0.76
Raet1aO08602 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Raet1aO08602 AC164433.2-201ENSMUST00000226346 1701 ntBASIC19.8■□□□□ 0.76
Raet1aO08602 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Raet1aO08602 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Raet1aO08602 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Raet1aO08602 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC19.8■□□□□ 0.76
Raet1aO08602 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Raet1aO08602 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Raet1aO08602 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.8■□□□□ 0.76
Raet1aO08602 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Raet1aO08602 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC19.79■□□□□ 0.76
Raet1aO08602 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Raet1aO08602 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Raet1aO08602 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC19.79■□□□□ 0.76
Raet1aO08602 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Raet1aO08602 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Raet1aO08602 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Raet1aO08602 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Raet1aO08602 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
Raet1aO08602 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Raet1aO08602 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Raet1aO08602 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Raet1aO08602 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Raet1aO08602 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Raet1aO08602 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Raet1aO08602 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
Raet1aO08602 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Raet1aO08602 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Raet1aO08602 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Raet1aO08602 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Raet1aO08602 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Raet1aO08602 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Raet1aO08602 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Raet1aO08602 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Raet1aO08602 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC19.75■□□□□ 0.75
Raet1aO08602 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC19.75■□□□□ 0.75
Raet1aO08602 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Raet1aO08602 Gm9910-201ENSMUST00000195385 1550 ntBASIC19.74■□□□□ 0.75
Raet1aO08602 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Raet1aO08602 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Raet1aO08602 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC19.74■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms