Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC23.07■■□□□ 1.28
Atf6F6VAN0 Gm12818-201ENSMUST00000117562 1349 ntBASIC23.07■■□□□ 1.28
Atf6F6VAN0 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
Atf6F6VAN0 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Atf6F6VAN0 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Atf6F6VAN0 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Atf6F6VAN0 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Atf6F6VAN0 H3f3aos-201ENSMUST00000097448 2905 ntBASIC23.05■■□□□ 1.28
Atf6F6VAN0 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Atf6F6VAN0 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Atf6F6VAN0 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Atf6F6VAN0 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Atf6F6VAN0 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Atf6F6VAN0 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Atf6F6VAN0 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Atf6F6VAN0 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Atf6F6VAN0 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Atf6F6VAN0 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
Atf6F6VAN0 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Atf6F6VAN0 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
Atf6F6VAN0 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Atf6F6VAN0 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Atf6F6VAN0 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
Atf6F6VAN0 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC23.02■■□□□ 1.28
Atf6F6VAN0 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Atf6F6VAN0 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
Atf6F6VAN0 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC23.01■■□□□ 1.27
Atf6F6VAN0 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Atf6F6VAN0 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
Atf6F6VAN0 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC23■■□□□ 1.27
Atf6F6VAN0 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Atf6F6VAN0 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
Atf6F6VAN0 AC153911.1-201ENSMUST00000220378 758 ntBASIC23■■□□□ 1.27
Atf6F6VAN0 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Atf6F6VAN0 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC22.99■■□□□ 1.27
Atf6F6VAN0 Pkd1-207ENSMUST00000228550 1050 ntBASIC22.99■■□□□ 1.27
Atf6F6VAN0 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Atf6F6VAN0 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Atf6F6VAN0 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Atf6F6VAN0 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Atf6F6VAN0 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Atf6F6VAN0 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Atf6F6VAN0 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Atf6F6VAN0 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Atf6F6VAN0 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
Atf6F6VAN0 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
Atf6F6VAN0 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC22.97■■□□□ 1.27
Atf6F6VAN0 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Atf6F6VAN0 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC22.97■■□□□ 1.27
Atf6F6VAN0 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC22.96■■□□□ 1.27
Atf6F6VAN0 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Atf6F6VAN0 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Atf6F6VAN0 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Atf6F6VAN0 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Atf6F6VAN0 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Atf6F6VAN0 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC22.95■■□□□ 1.26
Atf6F6VAN0 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC22.95■■□□□ 1.26
Atf6F6VAN0 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC22.95■■□□□ 1.26
Atf6F6VAN0 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC22.95■■□□□ 1.26
Atf6F6VAN0 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Atf6F6VAN0 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC22.95■■□□□ 1.26
Atf6F6VAN0 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Atf6F6VAN0 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Atf6F6VAN0 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC22.94■■□□□ 1.26
Atf6F6VAN0 Gm6311-201ENSMUST00000073790 878 ntBASIC22.94■■□□□ 1.26
Atf6F6VAN0 Terc-201ENSMUST00000082862 423 ntBASIC22.94■■□□□ 1.26
Atf6F6VAN0 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC22.94■■□□□ 1.26
Atf6F6VAN0 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Atf6F6VAN0 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC22.94■■□□□ 1.26
Atf6F6VAN0 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Atf6F6VAN0 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Atf6F6VAN0 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Atf6F6VAN0 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Atf6F6VAN0 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
Atf6F6VAN0 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Atf6F6VAN0 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Atf6F6VAN0 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC22.93■■□□□ 1.26
Atf6F6VAN0 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC22.92■■□□□ 1.26
Atf6F6VAN0 AC164433.2-201ENSMUST00000226346 1701 ntBASIC22.92■■□□□ 1.26
Atf6F6VAN0 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Atf6F6VAN0 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Atf6F6VAN0 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Atf6F6VAN0 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Atf6F6VAN0 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Atf6F6VAN0 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC22.91■■□□□ 1.26
Atf6F6VAN0 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC22.9■■□□□ 1.26
Atf6F6VAN0 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC22.9■■□□□ 1.26
Atf6F6VAN0 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Atf6F6VAN0 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
Atf6F6VAN0 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
Atf6F6VAN0 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Atf6F6VAN0 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Atf6F6VAN0 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC22.88■■□□□ 1.25
Atf6F6VAN0 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Atf6F6VAN0 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC22.88■■□□□ 1.25
Atf6F6VAN0 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC22.88■■□□□ 1.25
Atf6F6VAN0 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Atf6F6VAN0 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC22.87■■□□□ 1.25
Atf6F6VAN0 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Atf6F6VAN0 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC22.87■■□□□ 1.25
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms