Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cpsf4lE9Q2N0 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC19.12■□□□□ 0.65
Cpsf4lE9Q2N0 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Cpsf4lE9Q2N0 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC19.12■□□□□ 0.65
Cpsf4lE9Q2N0 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cpsf4lE9Q2N0 Gm9806-201ENSMUST00000051080 552 ntBASIC19.12■□□□□ 0.65
Cpsf4lE9Q2N0 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Cpsf4lE9Q2N0 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Cpsf4lE9Q2N0 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Cpsf4lE9Q2N0 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Cpsf4lE9Q2N0 Gm16437-201ENSMUST00000025669 507 ntBASIC19.11■□□□□ 0.65
Cpsf4lE9Q2N0 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cpsf4lE9Q2N0 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cpsf4lE9Q2N0 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cpsf4lE9Q2N0 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cpsf4lE9Q2N0 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Cpsf4lE9Q2N0 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Cpsf4lE9Q2N0 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cpsf4lE9Q2N0 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Cpsf4lE9Q2N0 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cpsf4lE9Q2N0 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Cpsf4lE9Q2N0 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cpsf4lE9Q2N0 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
Cpsf4lE9Q2N0 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cpsf4lE9Q2N0 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cpsf4lE9Q2N0 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cpsf4lE9Q2N0 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cpsf4lE9Q2N0 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cpsf4lE9Q2N0 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cpsf4lE9Q2N0 AC164433.2-201ENSMUST00000226346 1701 ntBASIC19.08■□□□□ 0.65
Cpsf4lE9Q2N0 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Cpsf4lE9Q2N0 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cpsf4lE9Q2N0 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cpsf4lE9Q2N0 Gm11175-201ENSMUST00000116172 543 ntBASIC19.07■□□□□ 0.64
Cpsf4lE9Q2N0 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Cpsf4lE9Q2N0 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cpsf4lE9Q2N0 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cpsf4lE9Q2N0 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cpsf4lE9Q2N0 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cpsf4lE9Q2N0 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC19.06■□□□□ 0.64
Cpsf4lE9Q2N0 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Cpsf4lE9Q2N0 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cpsf4lE9Q2N0 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cpsf4lE9Q2N0 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Cpsf4lE9Q2N0 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC19.06■□□□□ 0.64
Cpsf4lE9Q2N0 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Cpsf4lE9Q2N0 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cpsf4lE9Q2N0 Gm11687-201ENSMUST00000118911 886 ntBASIC19.05■□□□□ 0.64
Cpsf4lE9Q2N0 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Cpsf4lE9Q2N0 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Cpsf4lE9Q2N0 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC19.05■□□□□ 0.64
Cpsf4lE9Q2N0 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC19.05■□□□□ 0.64
Cpsf4lE9Q2N0 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cpsf4lE9Q2N0 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC19.04■□□□□ 0.64
Cpsf4lE9Q2N0 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cpsf4lE9Q2N0 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cpsf4lE9Q2N0 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cpsf4lE9Q2N0 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Cpsf4lE9Q2N0 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cpsf4lE9Q2N0 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cpsf4lE9Q2N0 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cpsf4lE9Q2N0 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cpsf4lE9Q2N0 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC19.03■□□□□ 0.64
Cpsf4lE9Q2N0 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cpsf4lE9Q2N0 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cpsf4lE9Q2N0 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC19.03■□□□□ 0.64
Cpsf4lE9Q2N0 Il17rd-202ENSMUST00000223942 2186 ntBASIC19.03■□□□□ 0.64
Cpsf4lE9Q2N0 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cpsf4lE9Q2N0 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cpsf4lE9Q2N0 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cpsf4lE9Q2N0 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cpsf4lE9Q2N0 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cpsf4lE9Q2N0 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cpsf4lE9Q2N0 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Cpsf4lE9Q2N0 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Cpsf4lE9Q2N0 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Cpsf4lE9Q2N0 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Cpsf4lE9Q2N0 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC19.01■□□□□ 0.63
Cpsf4lE9Q2N0 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cpsf4lE9Q2N0 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cpsf4lE9Q2N0 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cpsf4lE9Q2N0 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cpsf4lE9Q2N0 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC19.01■□□□□ 0.63
Cpsf4lE9Q2N0 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cpsf4lE9Q2N0 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cpsf4lE9Q2N0 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Cpsf4lE9Q2N0 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC19■□□□□ 0.63
Cpsf4lE9Q2N0 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cpsf4lE9Q2N0 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cpsf4lE9Q2N0 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19■□□□□ 0.63
Cpsf4lE9Q2N0 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cpsf4lE9Q2N0 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Cpsf4lE9Q2N0 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC18.99■□□□□ 0.63
Cpsf4lE9Q2N0 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC18.99■□□□□ 0.63
Cpsf4lE9Q2N0 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Cpsf4lE9Q2N0 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC18.98■□□□□ 0.63
Cpsf4lE9Q2N0 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cpsf4lE9Q2N0 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC18.97■□□□□ 0.63
Cpsf4lE9Q2N0 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cpsf4lE9Q2N0 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC18.96■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 1213.1 ms