Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Pcf11-205ENSMUST00000208255 1720 ntBASIC13.43□□□□□ -0.26
Herc1E9PZP8 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Herc1E9PZP8 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Herc1E9PZP8 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC13.42□□□□□ -0.26
Herc1E9PZP8 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Herc1E9PZP8 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Herc1E9PZP8 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Herc1E9PZP8 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Herc1E9PZP8 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Herc1E9PZP8 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Herc1E9PZP8 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC13.41□□□□□ -0.26
Herc1E9PZP8 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Herc1E9PZP8 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC13.41□□□□□ -0.26
Herc1E9PZP8 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC13.4□□□□□ -0.26
Herc1E9PZP8 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Herc1E9PZP8 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Herc1E9PZP8 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC13.4□□□□□ -0.26
Herc1E9PZP8 Gm22325-201ENSMUST00000158904 308 ntBASIC13.4□□□□□ -0.26
Herc1E9PZP8 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Herc1E9PZP8 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC13.4□□□□□ -0.27
Herc1E9PZP8 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Herc1E9PZP8 Gm45417-201ENSMUST00000209533 758 ntBASIC13.39□□□□□ -0.27
Herc1E9PZP8 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Herc1E9PZP8 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Herc1E9PZP8 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Herc1E9PZP8 AC122317.2-201ENSMUST00000218708 1248 ntBASIC13.39□□□□□ -0.27
Herc1E9PZP8 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Herc1E9PZP8 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Herc1E9PZP8 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Herc1E9PZP8 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Herc1E9PZP8 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Herc1E9PZP8 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Herc1E9PZP8 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC13.38□□□□□ -0.27
Herc1E9PZP8 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Herc1E9PZP8 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Herc1E9PZP8 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Herc1E9PZP8 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Herc1E9PZP8 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Herc1E9PZP8 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Herc1E9PZP8 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Herc1E9PZP8 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Herc1E9PZP8 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Herc1E9PZP8 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Herc1E9PZP8 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Herc1E9PZP8 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Herc1E9PZP8 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Herc1E9PZP8 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Herc1E9PZP8 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Herc1E9PZP8 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Herc1E9PZP8 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Herc1E9PZP8 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC13.35□□□□□ -0.27
Herc1E9PZP8 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Herc1E9PZP8 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Herc1E9PZP8 Gm28731-201ENSMUST00000185564 1569 ntBASIC13.34□□□□□ -0.27
Herc1E9PZP8 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Herc1E9PZP8 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Herc1E9PZP8 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Herc1E9PZP8 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Herc1E9PZP8 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Herc1E9PZP8 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Herc1E9PZP8 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Herc1E9PZP8 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC13.33□□□□□ -0.28
Herc1E9PZP8 Golgb1-201ENSMUST00000023534 498 ntBASIC13.33□□□□□ -0.28
Herc1E9PZP8 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC13.33□□□□□ -0.28
Herc1E9PZP8 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Herc1E9PZP8 Gm12922-201ENSMUST00000120626 809 ntBASIC13.33□□□□□ -0.28
Herc1E9PZP8 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC13.33□□□□□ -0.28
Herc1E9PZP8 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC13.32□□□□□ -0.28
Herc1E9PZP8 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC13.32□□□□□ -0.28
Herc1E9PZP8 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Herc1E9PZP8 Gm22238-201ENSMUST00000175222 88 ntBASIC13.32□□□□□ -0.28
Herc1E9PZP8 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Herc1E9PZP8 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Herc1E9PZP8 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Herc1E9PZP8 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC13.31□□□□□ -0.28
Herc1E9PZP8 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Herc1E9PZP8 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Herc1E9PZP8 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Herc1E9PZP8 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC13.3□□□□□ -0.28
Herc1E9PZP8 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC13.3□□□□□ -0.28
Herc1E9PZP8 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
Herc1E9PZP8 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Herc1E9PZP8 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Herc1E9PZP8 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC13.3□□□□□ -0.28
Herc1E9PZP8 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC13.3□□□□□ -0.28
Herc1E9PZP8 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Herc1E9PZP8 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Herc1E9PZP8 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Herc1E9PZP8 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Herc1E9PZP8 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Herc1E9PZP8 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Herc1E9PZP8 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC13.29□□□□□ -0.28
Herc1E9PZP8 Gm26571-201ENSMUST00000181399 666 ntBASIC13.29□□□□□ -0.28
Herc1E9PZP8 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Herc1E9PZP8 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Herc1E9PZP8 Gm5874-201ENSMUST00000096101 508 ntBASIC13.29□□□□□ -0.28
Herc1E9PZP8 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Herc1E9PZP8 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Herc1E9PZP8 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC13.29□□□□□ -0.28
Herc1E9PZP8 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms