Protein–RNA interactions for Protein: E9PXX9

Slc28a1, Sodium/nucleoside cotransporter, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc28a1E9PXX9 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Slc28a1E9PXX9 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Slc28a1E9PXX9 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Slc28a1E9PXX9 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Slc28a1E9PXX9 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Slc28a1E9PXX9 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Slc28a1E9PXX9 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC21.24■□□□□ 0.99
Slc28a1E9PXX9 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Slc28a1E9PXX9 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Slc28a1E9PXX9 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Slc28a1E9PXX9 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC21.23■□□□□ 0.99
Slc28a1E9PXX9 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Slc28a1E9PXX9 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Slc28a1E9PXX9 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Slc28a1E9PXX9 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Slc28a1E9PXX9 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Slc28a1E9PXX9 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Slc28a1E9PXX9 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Slc28a1E9PXX9 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Slc28a1E9PXX9 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.22■□□□□ 0.99
Slc28a1E9PXX9 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
Slc28a1E9PXX9 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Slc28a1E9PXX9 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Slc28a1E9PXX9 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Slc28a1E9PXX9 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Slc28a1E9PXX9 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Slc28a1E9PXX9 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Slc28a1E9PXX9 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Slc28a1E9PXX9 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Slc28a1E9PXX9 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Slc28a1E9PXX9 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Slc28a1E9PXX9 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.2■□□□□ 0.98
Slc28a1E9PXX9 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.19■□□□□ 0.98
Slc28a1E9PXX9 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Slc28a1E9PXX9 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Slc28a1E9PXX9 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC21.19■□□□□ 0.98
Slc28a1E9PXX9 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Slc28a1E9PXX9 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Slc28a1E9PXX9 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Slc28a1E9PXX9 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Slc28a1E9PXX9 Gm45855-201ENSMUST00000212546 880 ntBASIC21.17■□□□□ 0.98
Slc28a1E9PXX9 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Slc28a1E9PXX9 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Slc28a1E9PXX9 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Slc28a1E9PXX9 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Slc28a1E9PXX9 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Slc28a1E9PXX9 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Slc28a1E9PXX9 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Slc28a1E9PXX9 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
Slc28a1E9PXX9 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
Slc28a1E9PXX9 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Slc28a1E9PXX9 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Slc28a1E9PXX9 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Slc28a1E9PXX9 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Slc28a1E9PXX9 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Slc28a1E9PXX9 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Slc28a1E9PXX9 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Slc28a1E9PXX9 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.13■□□□□ 0.97
Slc28a1E9PXX9 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Slc28a1E9PXX9 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Slc28a1E9PXX9 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Slc28a1E9PXX9 Dmtn-209ENSMUST00000228295 2572 ntBASIC21.11■□□□□ 0.97
Slc28a1E9PXX9 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.11■□□□□ 0.97
Slc28a1E9PXX9 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Slc28a1E9PXX9 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Slc28a1E9PXX9 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.09■□□□□ 0.97
Slc28a1E9PXX9 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Slc28a1E9PXX9 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
Slc28a1E9PXX9 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Slc28a1E9PXX9 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Slc28a1E9PXX9 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Slc28a1E9PXX9 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Slc28a1E9PXX9 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Slc28a1E9PXX9 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Slc28a1E9PXX9 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC21.07■□□□□ 0.96
Slc28a1E9PXX9 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Slc28a1E9PXX9 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Slc28a1E9PXX9 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Slc28a1E9PXX9 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Slc28a1E9PXX9 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC21.07■□□□□ 0.96
Slc28a1E9PXX9 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Slc28a1E9PXX9 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Slc28a1E9PXX9 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Slc28a1E9PXX9 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Slc28a1E9PXX9 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC21.06■□□□□ 0.96
Slc28a1E9PXX9 Gm26766-202ENSMUST00000227544 2347 ntBASIC21.06■□□□□ 0.96
Slc28a1E9PXX9 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.06■□□□□ 0.96
Slc28a1E9PXX9 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Slc28a1E9PXX9 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Slc28a1E9PXX9 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Slc28a1E9PXX9 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Slc28a1E9PXX9 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.05■□□□□ 0.96
Slc28a1E9PXX9 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.05■□□□□ 0.96
Slc28a1E9PXX9 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Slc28a1E9PXX9 Gm20634-201ENSMUST00000090779 2956 ntBASIC21.05■□□□□ 0.96
Slc28a1E9PXX9 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Slc28a1E9PXX9 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Slc28a1E9PXX9 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Slc28a1E9PXX9 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Slc28a1E9PXX9 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC21.03■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms