Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Pcdh17E9PXF0 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Pcdh17E9PXF0 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdh17E9PXF0 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdh17E9PXF0 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdh17E9PXF0 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdh17E9PXF0 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Pcdh17E9PXF0 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdh17E9PXF0 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdh17E9PXF0 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.89■□□□□ 0.93
Pcdh17E9PXF0 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdh17E9PXF0 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Pcdh17E9PXF0 Gm44428-201ENSMUST00000204474 874 ntBASIC20.88■□□□□ 0.93
Pcdh17E9PXF0 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdh17E9PXF0 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Pcdh17E9PXF0 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdh17E9PXF0 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.88■□□□□ 0.93
Pcdh17E9PXF0 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Pcdh17E9PXF0 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.87■□□□□ 0.93
Pcdh17E9PXF0 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdh17E9PXF0 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.87■□□□□ 0.93
Pcdh17E9PXF0 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdh17E9PXF0 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdh17E9PXF0 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdh17E9PXF0 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdh17E9PXF0 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdh17E9PXF0 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdh17E9PXF0 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdh17E9PXF0 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdh17E9PXF0 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdh17E9PXF0 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Pcdh17E9PXF0 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdh17E9PXF0 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdh17E9PXF0 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdh17E9PXF0 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdh17E9PXF0 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdh17E9PXF0 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.83■□□□□ 0.93
Pcdh17E9PXF0 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.83■□□□□ 0.93
Pcdh17E9PXF0 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdh17E9PXF0 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
Pcdh17E9PXF0 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdh17E9PXF0 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdh17E9PXF0 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdh17E9PXF0 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.81■□□□□ 0.92
Pcdh17E9PXF0 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdh17E9PXF0 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdh17E9PXF0 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdh17E9PXF0 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdh17E9PXF0 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdh17E9PXF0 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdh17E9PXF0 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.79■□□□□ 0.92
Pcdh17E9PXF0 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Pcdh17E9PXF0 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdh17E9PXF0 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Pcdh17E9PXF0 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.78■□□□□ 0.92
Pcdh17E9PXF0 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdh17E9PXF0 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdh17E9PXF0 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Pcdh17E9PXF0 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdh17E9PXF0 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdh17E9PXF0 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Pcdh17E9PXF0 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdh17E9PXF0 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Pcdh17E9PXF0 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdh17E9PXF0 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdh17E9PXF0 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdh17E9PXF0 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdh17E9PXF0 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdh17E9PXF0 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.76■□□□□ 0.91
Pcdh17E9PXF0 Gm5921-201ENSMUST00000075898 882 ntBASIC20.76■□□□□ 0.91
Pcdh17E9PXF0 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdh17E9PXF0 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
Pcdh17E9PXF0 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdh17E9PXF0 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdh17E9PXF0 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Pcdh17E9PXF0 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.74■□□□□ 0.91
Pcdh17E9PXF0 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdh17E9PXF0 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.74■□□□□ 0.91
Pcdh17E9PXF0 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdh17E9PXF0 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdh17E9PXF0 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdh17E9PXF0 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Pcdh17E9PXF0 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.73■□□□□ 0.91
Pcdh17E9PXF0 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdh17E9PXF0 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdh17E9PXF0 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Pcdh17E9PXF0 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdh17E9PXF0 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdh17E9PXF0 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdh17E9PXF0 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdh17E9PXF0 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdh17E9PXF0 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Pcdh17E9PXF0 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Pcdh17E9PXF0 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Pcdh17E9PXF0 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.69■□□□□ 0.9
Pcdh17E9PXF0 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdh17E9PXF0 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdh17E9PXF0 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdh17E9PXF0 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdh17E9PXF0 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms