Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC32.81■■■□□ 2.84
Hfm1D3Z4R1 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
Hfm1D3Z4R1 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC32.8■■■□□ 2.84
Hfm1D3Z4R1 Gm9959-201ENSMUST00000068277 390 ntBASIC32.79■■■□□ 2.84
Hfm1D3Z4R1 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC32.79■■■□□ 2.84
Hfm1D3Z4R1 Gm42501-201ENSMUST00000200220 1026 ntBASIC32.78■■■□□ 2.84
Hfm1D3Z4R1 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC32.78■■■□□ 2.84
Hfm1D3Z4R1 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC32.77■■■□□ 2.84
Hfm1D3Z4R1 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC32.77■■■□□ 2.84
Hfm1D3Z4R1 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
Hfm1D3Z4R1 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC32.77■■■□□ 2.84
Hfm1D3Z4R1 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
Hfm1D3Z4R1 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC32.76■■■□□ 2.83
Hfm1D3Z4R1 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC32.76■■■□□ 2.83
Hfm1D3Z4R1 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC32.75■■■□□ 2.83
Hfm1D3Z4R1 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC32.75■■■□□ 2.83
Hfm1D3Z4R1 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
Hfm1D3Z4R1 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC32.72■■■□□ 2.83
Hfm1D3Z4R1 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC32.72■■■□□ 2.83
Hfm1D3Z4R1 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
Hfm1D3Z4R1 Gm18755-201ENSMUST00000218030 1099 ntBASIC32.72■■■□□ 2.83
Hfm1D3Z4R1 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC32.72■■■□□ 2.83
Hfm1D3Z4R1 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
Hfm1D3Z4R1 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC32.71■■■□□ 2.83
Hfm1D3Z4R1 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
Hfm1D3Z4R1 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC32.71■■■□□ 2.83
Hfm1D3Z4R1 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC32.7■■■□□ 2.83
Hfm1D3Z4R1 AC117769.4-201ENSMUST00000225679 685 ntBASIC32.7■■■□□ 2.83
Hfm1D3Z4R1 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC32.7■■■□□ 2.83
Hfm1D3Z4R1 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
Hfm1D3Z4R1 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.82
Hfm1D3Z4R1 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
Hfm1D3Z4R1 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
Hfm1D3Z4R1 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC32.69■■■□□ 2.82
Hfm1D3Z4R1 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC32.69■■■□□ 2.82
Hfm1D3Z4R1 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
Hfm1D3Z4R1 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC32.69■■■□□ 2.82
Hfm1D3Z4R1 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC32.68■■■□□ 2.82
Hfm1D3Z4R1 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
Hfm1D3Z4R1 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
Hfm1D3Z4R1 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
Hfm1D3Z4R1 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC32.67■■■□□ 2.82
Hfm1D3Z4R1 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC32.66■■■□□ 2.82
Hfm1D3Z4R1 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
Hfm1D3Z4R1 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC32.66■■■□□ 2.82
Hfm1D3Z4R1 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC32.66■■■□□ 2.82
Hfm1D3Z4R1 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC32.66■■■□□ 2.82
Hfm1D3Z4R1 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC32.65■■■□□ 2.82
Hfm1D3Z4R1 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
Hfm1D3Z4R1 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC32.65■■■□□ 2.82
Hfm1D3Z4R1 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
Hfm1D3Z4R1 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
Hfm1D3Z4R1 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
Hfm1D3Z4R1 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC32.65■■■□□ 2.82
Hfm1D3Z4R1 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
Hfm1D3Z4R1 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC32.62■■■□□ 2.81
Hfm1D3Z4R1 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC32.62■■■□□ 2.81
Hfm1D3Z4R1 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
Hfm1D3Z4R1 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC32.62■■■□□ 2.81
Hfm1D3Z4R1 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC32.6■■■□□ 2.81
Hfm1D3Z4R1 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
Hfm1D3Z4R1 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC32.59■■■□□ 2.81
Hfm1D3Z4R1 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC32.59■■■□□ 2.81
Hfm1D3Z4R1 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC32.59■■■□□ 2.81
Hfm1D3Z4R1 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
Hfm1D3Z4R1 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
Hfm1D3Z4R1 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.81
Hfm1D3Z4R1 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC32.57■■■□□ 2.8
Hfm1D3Z4R1 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
Hfm1D3Z4R1 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC32.57■■■□□ 2.8
Hfm1D3Z4R1 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC32.57■■■□□ 2.8
Hfm1D3Z4R1 Gm6206-201ENSMUST00000133472 2199 ntBASIC32.57■■■□□ 2.8
Hfm1D3Z4R1 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
Hfm1D3Z4R1 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
Hfm1D3Z4R1 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
Hfm1D3Z4R1 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC32.55■■■□□ 2.8
Hfm1D3Z4R1 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC32.55■■■□□ 2.8
Hfm1D3Z4R1 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC32.54■■■□□ 2.8
Hfm1D3Z4R1 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC32.53■■■□□ 2.8
Hfm1D3Z4R1 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
Hfm1D3Z4R1 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC32.53■■■□□ 2.8
Hfm1D3Z4R1 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
Hfm1D3Z4R1 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
Hfm1D3Z4R1 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.8
Hfm1D3Z4R1 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC32.51■■■□□ 2.8
Hfm1D3Z4R1 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC32.51■■■□□ 2.79
Hfm1D3Z4R1 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
Hfm1D3Z4R1 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
Hfm1D3Z4R1 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
Hfm1D3Z4R1 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
Hfm1D3Z4R1 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
Hfm1D3Z4R1 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
Hfm1D3Z4R1 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
Hfm1D3Z4R1 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC32.48■■■□□ 2.79
Hfm1D3Z4R1 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
Hfm1D3Z4R1 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC32.48■■■□□ 2.79
Hfm1D3Z4R1 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC32.48■■■□□ 2.79
Hfm1D3Z4R1 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC32.48■■■□□ 2.79
Hfm1D3Z4R1 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
Hfm1D3Z4R1 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC32.47■■■□□ 2.79
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms