Protein–RNA interactions for Protein: B2RRE7

Otud4, OTU domain-containing protein 4, mousemouse

Known RBP Predictions only

Length 1,107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud4B2RRE7 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.1■□□□□ 0.97
Otud4B2RRE7 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Otud4B2RRE7 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Otud4B2RRE7 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Otud4B2RRE7 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Otud4B2RRE7 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Otud4B2RRE7 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Otud4B2RRE7 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Otud4B2RRE7 Gm9806-201ENSMUST00000051080 552 ntBASIC21.09■□□□□ 0.97
Otud4B2RRE7 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Otud4B2RRE7 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Otud4B2RRE7 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC21.09■□□□□ 0.97
Otud4B2RRE7 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Otud4B2RRE7 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Otud4B2RRE7 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Otud4B2RRE7 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Otud4B2RRE7 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Otud4B2RRE7 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Otud4B2RRE7 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Otud4B2RRE7 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Otud4B2RRE7 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Otud4B2RRE7 Gm42699-201ENSMUST00000198104 1657 ntBASIC21.06■□□□□ 0.96
Otud4B2RRE7 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Otud4B2RRE7 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC21.06■□□□□ 0.96
Otud4B2RRE7 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC21.06■□□□□ 0.96
Otud4B2RRE7 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Otud4B2RRE7 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Otud4B2RRE7 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Otud4B2RRE7 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Otud4B2RRE7 Gm16437-201ENSMUST00000025669 507 ntBASIC21.05■□□□□ 0.96
Otud4B2RRE7 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Otud4B2RRE7 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Otud4B2RRE7 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC21.04■□□□□ 0.96
Otud4B2RRE7 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC21.04■□□□□ 0.96
Otud4B2RRE7 Gm12366-201ENSMUST00000121722 873 ntBASIC21.04■□□□□ 0.96
Otud4B2RRE7 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC21.04■□□□□ 0.96
Otud4B2RRE7 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC21.04■□□□□ 0.96
Otud4B2RRE7 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Otud4B2RRE7 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC21.04■□□□□ 0.96
Otud4B2RRE7 Gm5786-201ENSMUST00000085368 882 ntBASIC21.04■□□□□ 0.96
Otud4B2RRE7 Gm4799-201ENSMUST00000095396 657 ntBASIC21.04■□□□□ 0.96
Otud4B2RRE7 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Otud4B2RRE7 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Otud4B2RRE7 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.04■□□□□ 0.96
Otud4B2RRE7 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Otud4B2RRE7 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Otud4B2RRE7 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Otud4B2RRE7 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC21.03■□□□□ 0.96
Otud4B2RRE7 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Otud4B2RRE7 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.03■□□□□ 0.96
Otud4B2RRE7 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Otud4B2RRE7 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Otud4B2RRE7 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Otud4B2RRE7 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Otud4B2RRE7 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.02■□□□□ 0.96
Otud4B2RRE7 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Otud4B2RRE7 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.01■□□□□ 0.95
Otud4B2RRE7 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21.01■□□□□ 0.95
Otud4B2RRE7 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Otud4B2RRE7 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.01■□□□□ 0.95
Otud4B2RRE7 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Otud4B2RRE7 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Otud4B2RRE7 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Otud4B2RRE7 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Otud4B2RRE7 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Otud4B2RRE7 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Otud4B2RRE7 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Otud4B2RRE7 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Otud4B2RRE7 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC21■□□□□ 0.95
Otud4B2RRE7 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Otud4B2RRE7 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Otud4B2RRE7 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Otud4B2RRE7 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Otud4B2RRE7 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
Otud4B2RRE7 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Otud4B2RRE7 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Otud4B2RRE7 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
Otud4B2RRE7 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC20.98■□□□□ 0.95
Otud4B2RRE7 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Otud4B2RRE7 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Otud4B2RRE7 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Otud4B2RRE7 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Otud4B2RRE7 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Otud4B2RRE7 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Otud4B2RRE7 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC20.97■□□□□ 0.95
Otud4B2RRE7 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.97■□□□□ 0.95
Otud4B2RRE7 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Otud4B2RRE7 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Otud4B2RRE7 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Otud4B2RRE7 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Otud4B2RRE7 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Otud4B2RRE7 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Otud4B2RRE7 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Otud4B2RRE7 AC154454.1-201ENSMUST00000225253 216 ntBASIC20.95■□□□□ 0.94
Otud4B2RRE7 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Otud4B2RRE7 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Otud4B2RRE7 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Otud4B2RRE7 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Otud4B2RRE7 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Otud4B2RRE7 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms