Protein–RNA interactions for Protein: B1AYL1

Scn7a, Sodium channel protein, mousemouse

Predictions only

Length 1,681 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn7aB1AYL1 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
Scn7aB1AYL1 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC30.15■■■□□ 2.42
Scn7aB1AYL1 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Scn7aB1AYL1 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC30.15■■■□□ 2.42
Scn7aB1AYL1 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Scn7aB1AYL1 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC30.15■■■□□ 2.42
Scn7aB1AYL1 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC30.14■■■□□ 2.42
Scn7aB1AYL1 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC30.14■■■□□ 2.42
Scn7aB1AYL1 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC30.14■■■□□ 2.42
Scn7aB1AYL1 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
Scn7aB1AYL1 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
Scn7aB1AYL1 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
Scn7aB1AYL1 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC30.13■■■□□ 2.41
Scn7aB1AYL1 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
Scn7aB1AYL1 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC30.12■■■□□ 2.41
Scn7aB1AYL1 Gm5522-201ENSMUST00000189483 1242 ntBASIC30.11■■■□□ 2.41
Scn7aB1AYL1 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC30.11■■■□□ 2.41
Scn7aB1AYL1 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Scn7aB1AYL1 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC30.11■■■□□ 2.41
Scn7aB1AYL1 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Scn7aB1AYL1 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Scn7aB1AYL1 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Scn7aB1AYL1 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
Scn7aB1AYL1 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
Scn7aB1AYL1 Gm45444-201ENSMUST00000211394 898 ntBASIC30.09■■■□□ 2.41
Scn7aB1AYL1 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
Scn7aB1AYL1 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
Scn7aB1AYL1 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
Scn7aB1AYL1 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC30.08■■■□□ 2.41
Scn7aB1AYL1 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
Scn7aB1AYL1 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
Scn7aB1AYL1 Gm13238-201ENSMUST00000117655 780 ntBASIC30.05■■■□□ 2.4
Scn7aB1AYL1 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
Scn7aB1AYL1 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC30.04■■■□□ 2.4
Scn7aB1AYL1 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
Scn7aB1AYL1 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
Scn7aB1AYL1 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
Scn7aB1AYL1 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC30.03■■■□□ 2.4
Scn7aB1AYL1 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
Scn7aB1AYL1 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
Scn7aB1AYL1 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC30.02■■■□□ 2.4
Scn7aB1AYL1 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC30.02■■■□□ 2.4
Scn7aB1AYL1 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC30.02■■■□□ 2.4
Scn7aB1AYL1 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
Scn7aB1AYL1 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
Scn7aB1AYL1 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC30.02■■■□□ 2.4
Scn7aB1AYL1 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC30.02■■■□□ 2.4
Scn7aB1AYL1 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
Scn7aB1AYL1 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC30.01■■■□□ 2.4
Scn7aB1AYL1 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC30.01■■■□□ 2.4
Scn7aB1AYL1 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
Scn7aB1AYL1 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC30.01■■■□□ 2.39
Scn7aB1AYL1 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC30.01■■■□□ 2.39
Scn7aB1AYL1 Gm22567-201ENSMUST00000175542 342 ntBASIC30.01■■■□□ 2.39
Scn7aB1AYL1 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC30.01■■■□□ 2.39
Scn7aB1AYL1 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
Scn7aB1AYL1 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC30■■■□□ 2.39
Scn7aB1AYL1 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC30■■■□□ 2.39
Scn7aB1AYL1 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC30■■■□□ 2.39
Scn7aB1AYL1 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC30■■■□□ 2.39
Scn7aB1AYL1 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC29.99■■■□□ 2.39
Scn7aB1AYL1 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC29.98■■■□□ 2.39
Scn7aB1AYL1 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Scn7aB1AYL1 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Scn7aB1AYL1 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC29.97■■■□□ 2.39
Scn7aB1AYL1 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
Scn7aB1AYL1 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC29.97■■■□□ 2.39
Scn7aB1AYL1 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC29.96■■■□□ 2.39
Scn7aB1AYL1 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
Scn7aB1AYL1 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
Scn7aB1AYL1 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
Scn7aB1AYL1 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC29.95■■■□□ 2.38
Scn7aB1AYL1 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC29.94■■■□□ 2.38
Scn7aB1AYL1 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC29.94■■■□□ 2.38
Scn7aB1AYL1 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC29.93■■■□□ 2.38
Scn7aB1AYL1 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
Scn7aB1AYL1 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
Scn7aB1AYL1 AC122428.3-201ENSMUST00000215551 2290 ntBASIC29.91■■■□□ 2.38
Scn7aB1AYL1 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC29.91■■■□□ 2.38
Scn7aB1AYL1 Gm15546-201ENSMUST00000122095 826 ntBASIC29.9■■■□□ 2.38
Scn7aB1AYL1 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
Scn7aB1AYL1 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC29.89■■■□□ 2.38
Scn7aB1AYL1 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.37
Scn7aB1AYL1 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC29.89■■■□□ 2.37
Scn7aB1AYL1 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC29.89■■■□□ 2.37
Scn7aB1AYL1 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC29.88■■■□□ 2.37
Scn7aB1AYL1 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC29.86■■■□□ 2.37
Scn7aB1AYL1 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
Scn7aB1AYL1 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC29.85■■■□□ 2.37
Scn7aB1AYL1 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC29.85■■■□□ 2.37
Scn7aB1AYL1 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC29.84■■■□□ 2.37
Scn7aB1AYL1 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
Scn7aB1AYL1 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC29.84■■■□□ 2.37
Scn7aB1AYL1 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
Scn7aB1AYL1 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC29.84■■■□□ 2.37
Scn7aB1AYL1 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
Scn7aB1AYL1 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
Scn7aB1AYL1 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC29.83■■■□□ 2.37
Scn7aB1AYL1 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC29.83■■■□□ 2.37
Scn7aB1AYL1 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC29.83■■■□□ 2.37
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms