Protein–RNA interactions for Protein: A0A140T8V5

Pcna-ps2, Proliferating cell nuclear antigen, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcna-ps2A0A140T8V5 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Pcna-ps2A0A140T8V5 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Pcna-ps2A0A140T8V5 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Pcna-ps2A0A140T8V5 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC22.44■■□□□ 1.18
Pcna-ps2A0A140T8V5 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Pcna-ps2A0A140T8V5 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Pcna-ps2A0A140T8V5 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
Pcna-ps2A0A140T8V5 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Pcna-ps2A0A140T8V5 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
Pcna-ps2A0A140T8V5 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Pcna-ps2A0A140T8V5 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
Pcna-ps2A0A140T8V5 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Pcna-ps2A0A140T8V5 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Pcna-ps2A0A140T8V5 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Pcna-ps2A0A140T8V5 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC22.42■■□□□ 1.18
Pcna-ps2A0A140T8V5 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Pcna-ps2A0A140T8V5 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
Pcna-ps2A0A140T8V5 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Pcna-ps2A0A140T8V5 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
Pcna-ps2A0A140T8V5 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Pcna-ps2A0A140T8V5 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Pcna-ps2A0A140T8V5 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
Pcna-ps2A0A140T8V5 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC22.4■■□□□ 1.18
Pcna-ps2A0A140T8V5 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Pcna-ps2A0A140T8V5 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
Pcna-ps2A0A140T8V5 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Pcna-ps2A0A140T8V5 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Pcna-ps2A0A140T8V5 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
Pcna-ps2A0A140T8V5 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Pcna-ps2A0A140T8V5 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.17
Pcna-ps2A0A140T8V5 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Pcna-ps2A0A140T8V5 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Pcna-ps2A0A140T8V5 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
Pcna-ps2A0A140T8V5 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC22.38■■□□□ 1.17
Pcna-ps2A0A140T8V5 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Pcna-ps2A0A140T8V5 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Pcna-ps2A0A140T8V5 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
Pcna-ps2A0A140T8V5 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Pcna-ps2A0A140T8V5 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Pcna-ps2A0A140T8V5 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
Pcna-ps2A0A140T8V5 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC22.37■■□□□ 1.17
Pcna-ps2A0A140T8V5 AC167019.3-201ENSMUST00000228225 1266 ntBASIC22.37■■□□□ 1.17
Pcna-ps2A0A140T8V5 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
Pcna-ps2A0A140T8V5 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Pcna-ps2A0A140T8V5 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Pcna-ps2A0A140T8V5 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Pcna-ps2A0A140T8V5 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC22.36■■□□□ 1.17
Pcna-ps2A0A140T8V5 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Pcna-ps2A0A140T8V5 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Pcna-ps2A0A140T8V5 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
Pcna-ps2A0A140T8V5 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
Pcna-ps2A0A140T8V5 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Pcna-ps2A0A140T8V5 Gm5987-201ENSMUST00000196433 1151 ntBASIC22.35■■□□□ 1.17
Pcna-ps2A0A140T8V5 Mir3960-201ENSMUST00000198213 73 ntBASIC22.35■■□□□ 1.17
Pcna-ps2A0A140T8V5 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Pcna-ps2A0A140T8V5 Gm13889-201ENSMUST00000099689 1386 ntBASIC22.35■■□□□ 1.17
Pcna-ps2A0A140T8V5 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC22.35■■□□□ 1.17
Pcna-ps2A0A140T8V5 Gm4419-202ENSMUST00000226239 1431 ntBASIC22.34■■□□□ 1.17
Pcna-ps2A0A140T8V5 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Pcna-ps2A0A140T8V5 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC22.34■■□□□ 1.17
Pcna-ps2A0A140T8V5 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
Pcna-ps2A0A140T8V5 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Pcna-ps2A0A140T8V5 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Pcna-ps2A0A140T8V5 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Pcna-ps2A0A140T8V5 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.17
Pcna-ps2A0A140T8V5 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Pcna-ps2A0A140T8V5 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Pcna-ps2A0A140T8V5 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Pcna-ps2A0A140T8V5 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC22.32■■□□□ 1.16
Pcna-ps2A0A140T8V5 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pcna-ps2A0A140T8V5 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pcna-ps2A0A140T8V5 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pcna-ps2A0A140T8V5 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pcna-ps2A0A140T8V5 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC22.31■■□□□ 1.16
Pcna-ps2A0A140T8V5 Gm6311-201ENSMUST00000073790 878 ntBASIC22.31■■□□□ 1.16
Pcna-ps2A0A140T8V5 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC22.3■■□□□ 1.16
Pcna-ps2A0A140T8V5 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Pcna-ps2A0A140T8V5 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Pcna-ps2A0A140T8V5 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC22.3■■□□□ 1.16
Pcna-ps2A0A140T8V5 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC22.3■■□□□ 1.16
Pcna-ps2A0A140T8V5 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Pcna-ps2A0A140T8V5 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
Pcna-ps2A0A140T8V5 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Pcna-ps2A0A140T8V5 Gm17641-201ENSMUST00000166328 2350 ntBASIC22.3■■□□□ 1.16
Pcna-ps2A0A140T8V5 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pcna-ps2A0A140T8V5 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC22.29■■□□□ 1.16
Pcna-ps2A0A140T8V5 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
Pcna-ps2A0A140T8V5 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC22.29■■□□□ 1.16
Pcna-ps2A0A140T8V5 AC154454.1-201ENSMUST00000225253 216 ntBASIC22.29■■□□□ 1.16
Pcna-ps2A0A140T8V5 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pcna-ps2A0A140T8V5 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pcna-ps2A0A140T8V5 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pcna-ps2A0A140T8V5 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC22.28■■□□□ 1.16
Pcna-ps2A0A140T8V5 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pcna-ps2A0A140T8V5 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pcna-ps2A0A140T8V5 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
Pcna-ps2A0A140T8V5 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Pcna-ps2A0A140T8V5 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC22.27■■□□□ 1.16
Pcna-ps2A0A140T8V5 Gm45364-201ENSMUST00000210883 159 ntBASIC22.27■■□□□ 1.16
Pcna-ps2A0A140T8V5 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC22.27■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 12.3 ms