Protein–RNA interactions for Protein: A0A0G2JG37

Trav9d-4, T cell receptor alpha variable 9D-4 (Fragment), mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4A0A0G2JG37 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav9d-4A0A0G2JG37 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav9d-4A0A0G2JG37 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav9d-4A0A0G2JG37 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav9d-4A0A0G2JG37 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav9d-4A0A0G2JG37 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav9d-4A0A0G2JG37 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav9d-4A0A0G2JG37 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav9d-4A0A0G2JG37 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Trav9d-4A0A0G2JG37 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav9d-4A0A0G2JG37 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav9d-4A0A0G2JG37 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav9d-4A0A0G2JG37 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav9d-4A0A0G2JG37 Particl-201ENSMUST00000205370 1560 ntBASIC15.36■□□□□ 0.05
Trav9d-4A0A0G2JG37 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Trav9d-4A0A0G2JG37 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav9d-4A0A0G2JG37 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC15.35■□□□□ 0.05
Trav9d-4A0A0G2JG37 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav9d-4A0A0G2JG37 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
Trav9d-4A0A0G2JG37 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Trav9d-4A0A0G2JG37 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav9d-4A0A0G2JG37 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav9d-4A0A0G2JG37 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC15.34■□□□□ 0.05
Trav9d-4A0A0G2JG37 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav9d-4A0A0G2JG37 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
Trav9d-4A0A0G2JG37 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav9d-4A0A0G2JG37 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav9d-4A0A0G2JG37 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Trav9d-4A0A0G2JG37 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Trav9d-4A0A0G2JG37 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav9d-4A0A0G2JG37 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav9d-4A0A0G2JG37 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav9d-4A0A0G2JG37 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav9d-4A0A0G2JG37 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav9d-4A0A0G2JG37 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav9d-4A0A0G2JG37 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trav9d-4A0A0G2JG37 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC15.33■□□□□ 0.04
Trav9d-4A0A0G2JG37 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Trav9d-4A0A0G2JG37 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Trav9d-4A0A0G2JG37 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav9d-4A0A0G2JG37 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav9d-4A0A0G2JG37 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Trav9d-4A0A0G2JG37 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav9d-4A0A0G2JG37 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC15.33■□□□□ 0.04
Trav9d-4A0A0G2JG37 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC15.33■□□□□ 0.04
Trav9d-4A0A0G2JG37 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav9d-4A0A0G2JG37 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Trav9d-4A0A0G2JG37 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Trav9d-4A0A0G2JG37 Gm42699-201ENSMUST00000198104 1657 ntBASIC15.32■□□□□ 0.04
Trav9d-4A0A0G2JG37 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav9d-4A0A0G2JG37 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav9d-4A0A0G2JG37 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav9d-4A0A0G2JG37 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Trav9d-4A0A0G2JG37 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC15.32■□□□□ 0.04
Trav9d-4A0A0G2JG37 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav9d-4A0A0G2JG37 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav9d-4A0A0G2JG37 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC15.31■□□□□ 0.04
Trav9d-4A0A0G2JG37 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav9d-4A0A0G2JG37 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
Trav9d-4A0A0G2JG37 Gm43863-201ENSMUST00000203822 1192 ntBASIC15.31■□□□□ 0.04
Trav9d-4A0A0G2JG37 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav9d-4A0A0G2JG37 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav9d-4A0A0G2JG37 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav9d-4A0A0G2JG37 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav9d-4A0A0G2JG37 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav9d-4A0A0G2JG37 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav9d-4A0A0G2JG37 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Trav9d-4A0A0G2JG37 AC157572.2-201ENSMUST00000226970 908 ntBASIC15.3■□□□□ 0.04
Trav9d-4A0A0G2JG37 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav9d-4A0A0G2JG37 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav9d-4A0A0G2JG37 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Trav9d-4A0A0G2JG37 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav9d-4A0A0G2JG37 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav9d-4A0A0G2JG37 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
Trav9d-4A0A0G2JG37 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav9d-4A0A0G2JG37 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Trav9d-4A0A0G2JG37 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Trav9d-4A0A0G2JG37 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav9d-4A0A0G2JG37 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC15.29■□□□□ 0.04
Trav9d-4A0A0G2JG37 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav9d-4A0A0G2JG37 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Trav9d-4A0A0G2JG37 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav9d-4A0A0G2JG37 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC15.28■□□□□ 0.04
Trav9d-4A0A0G2JG37 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Trav9d-4A0A0G2JG37 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav9d-4A0A0G2JG37 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav9d-4A0A0G2JG37 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav9d-4A0A0G2JG37 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Trav9d-4A0A0G2JG37 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Trav9d-4A0A0G2JG37 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC15.26■□□□□ 0.03
Trav9d-4A0A0G2JG37 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC15.26■□□□□ 0.03
Trav9d-4A0A0G2JG37 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav9d-4A0A0G2JG37 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav9d-4A0A0G2JG37 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Trav9d-4A0A0G2JG37 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Trav9d-4A0A0G2JG37 Zfp131-205ENSMUST00000223812 663 ntBASIC15.26■□□□□ 0.03
Trav9d-4A0A0G2JG37 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav9d-4A0A0G2JG37 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav9d-4A0A0G2JG37 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav9d-4A0A0G2JG37 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms