Protein–RNA interactions for Protein: A0A0G2JG17

Trav23, T cell receptor alpha variable 23 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav23A0A0G2JG17 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trav23A0A0G2JG17 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trav23A0A0G2JG17 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC18.24■□□□□ 0.51
Trav23A0A0G2JG17 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trav23A0A0G2JG17 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trav23A0A0G2JG17 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
Trav23A0A0G2JG17 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trav23A0A0G2JG17 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trav23A0A0G2JG17 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trav23A0A0G2JG17 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Trav23A0A0G2JG17 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav23A0A0G2JG17 Gm11687-201ENSMUST00000118911 886 ntBASIC18.23■□□□□ 0.51
Trav23A0A0G2JG17 Gm16437-201ENSMUST00000025669 507 ntBASIC18.23■□□□□ 0.51
Trav23A0A0G2JG17 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav23A0A0G2JG17 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav23A0A0G2JG17 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trav23A0A0G2JG17 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trav23A0A0G2JG17 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Trav23A0A0G2JG17 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav23A0A0G2JG17 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav23A0A0G2JG17 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC18.22■□□□□ 0.51
Trav23A0A0G2JG17 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trav23A0A0G2JG17 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav23A0A0G2JG17 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC18.22■□□□□ 0.51
Trav23A0A0G2JG17 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trav23A0A0G2JG17 AC122317.2-201ENSMUST00000218708 1248 ntBASIC18.21■□□□□ 0.51
Trav23A0A0G2JG17 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trav23A0A0G2JG17 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav23A0A0G2JG17 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trav23A0A0G2JG17 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Trav23A0A0G2JG17 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav23A0A0G2JG17 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav23A0A0G2JG17 Gm9812-201ENSMUST00000061934 968 ntBASIC18.2■□□□□ 0.5
Trav23A0A0G2JG17 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trav23A0A0G2JG17 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Trav23A0A0G2JG17 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC18.19■□□□□ 0.5
Trav23A0A0G2JG17 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Trav23A0A0G2JG17 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav23A0A0G2JG17 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Trav23A0A0G2JG17 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav23A0A0G2JG17 Gm4419-202ENSMUST00000226239 1431 ntBASIC18.18■□□□□ 0.5
Trav23A0A0G2JG17 Mir6538-201ENSMUST00000183713 110 ntBASIC18.18■□□□□ 0.5
Trav23A0A0G2JG17 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav23A0A0G2JG17 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Trav23A0A0G2JG17 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trav23A0A0G2JG17 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Trav23A0A0G2JG17 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC18.17■□□□□ 0.5
Trav23A0A0G2JG17 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav23A0A0G2JG17 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav23A0A0G2JG17 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trav23A0A0G2JG17 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav23A0A0G2JG17 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav23A0A0G2JG17 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC18.16■□□□□ 0.5
Trav23A0A0G2JG17 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC18.16■□□□□ 0.5
Trav23A0A0G2JG17 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC18.16■□□□□ 0.5
Trav23A0A0G2JG17 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trav23A0A0G2JG17 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trav23A0A0G2JG17 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Trav23A0A0G2JG17 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
Trav23A0A0G2JG17 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trav23A0A0G2JG17 Gm9910-201ENSMUST00000195385 1550 ntBASIC18.14■□□□□ 0.49
Trav23A0A0G2JG17 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Trav23A0A0G2JG17 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trav23A0A0G2JG17 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC18.14■□□□□ 0.49
Trav23A0A0G2JG17 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav23A0A0G2JG17 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav23A0A0G2JG17 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
Trav23A0A0G2JG17 AC153911.1-201ENSMUST00000220378 758 ntBASIC18.13■□□□□ 0.49
Trav23A0A0G2JG17 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trav23A0A0G2JG17 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav23A0A0G2JG17 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Trav23A0A0G2JG17 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.12■□□□□ 0.49
Trav23A0A0G2JG17 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav23A0A0G2JG17 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav23A0A0G2JG17 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trav23A0A0G2JG17 Terc-201ENSMUST00000082862 423 ntBASIC18.12■□□□□ 0.49
Trav23A0A0G2JG17 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC18.12■□□□□ 0.49
Trav23A0A0G2JG17 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav23A0A0G2JG17 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav23A0A0G2JG17 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav23A0A0G2JG17 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav23A0A0G2JG17 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trav23A0A0G2JG17 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav23A0A0G2JG17 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trav23A0A0G2JG17 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav23A0A0G2JG17 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav23A0A0G2JG17 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC18.1■□□□□ 0.49
Trav23A0A0G2JG17 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav23A0A0G2JG17 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trav23A0A0G2JG17 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC18.1■□□□□ 0.49
Trav23A0A0G2JG17 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Trav23A0A0G2JG17 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC18.1■□□□□ 0.49
Trav23A0A0G2JG17 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav23A0A0G2JG17 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav23A0A0G2JG17 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav23A0A0G2JG17 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Trav23A0A0G2JG17 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav23A0A0G2JG17 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trav23A0A0G2JG17 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
Trav23A0A0G2JG17 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms