Protein–RNA interactions for Protein: A0A0B4J1J0

Igkv4-50, Immunoglobulin kappa variable 4-50 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv4-50A0A0B4J1J0 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Igkv4-50A0A0B4J1J0 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC18.92■□□□□ 0.62
Igkv4-50A0A0B4J1J0 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC18.91■□□□□ 0.62
Igkv4-50A0A0B4J1J0 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Igkv4-50A0A0B4J1J0 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Igkv4-50A0A0B4J1J0 Gm12818-201ENSMUST00000117562 1349 ntBASIC18.91■□□□□ 0.62
Igkv4-50A0A0B4J1J0 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Igkv4-50A0A0B4J1J0 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Igkv4-50A0A0B4J1J0 Gm45364-201ENSMUST00000210883 159 ntBASIC18.9■□□□□ 0.62
Igkv4-50A0A0B4J1J0 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Igkv4-50A0A0B4J1J0 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Igkv4-50A0A0B4J1J0 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Igkv4-50A0A0B4J1J0 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC18.9■□□□□ 0.62
Igkv4-50A0A0B4J1J0 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Igkv4-50A0A0B4J1J0 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC18.89■□□□□ 0.62
Igkv4-50A0A0B4J1J0 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Igkv4-50A0A0B4J1J0 AC153911.1-201ENSMUST00000220378 758 ntBASIC18.89■□□□□ 0.61
Igkv4-50A0A0B4J1J0 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC18.89■□□□□ 0.61
Igkv4-50A0A0B4J1J0 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Igkv4-50A0A0B4J1J0 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Igkv4-50A0A0B4J1J0 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Igkv4-50A0A0B4J1J0 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC18.88■□□□□ 0.61
Igkv4-50A0A0B4J1J0 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC18.88■□□□□ 0.61
Igkv4-50A0A0B4J1J0 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Igkv4-50A0A0B4J1J0 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Igkv4-50A0A0B4J1J0 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Igkv4-50A0A0B4J1J0 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Igkv4-50A0A0B4J1J0 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Igkv4-50A0A0B4J1J0 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Igkv4-50A0A0B4J1J0 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Igkv4-50A0A0B4J1J0 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Igkv4-50A0A0B4J1J0 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Igkv4-50A0A0B4J1J0 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Igkv4-50A0A0B4J1J0 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Igkv4-50A0A0B4J1J0 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC18.85■□□□□ 0.61
Igkv4-50A0A0B4J1J0 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Igkv4-50A0A0B4J1J0 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Igkv4-50A0A0B4J1J0 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Igkv4-50A0A0B4J1J0 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Igkv4-50A0A0B4J1J0 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
Igkv4-50A0A0B4J1J0 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Igkv4-50A0A0B4J1J0 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Igkv4-50A0A0B4J1J0 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC18.84■□□□□ 0.61
Igkv4-50A0A0B4J1J0 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Igkv4-50A0A0B4J1J0 AC164433.2-201ENSMUST00000226346 1701 ntBASIC18.83■□□□□ 0.61
Igkv4-50A0A0B4J1J0 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC18.83■□□□□ 0.6
Igkv4-50A0A0B4J1J0 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Igkv4-50A0A0B4J1J0 AC167019.3-201ENSMUST00000228225 1266 ntBASIC18.83■□□□□ 0.6
Igkv4-50A0A0B4J1J0 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Igkv4-50A0A0B4J1J0 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Igkv4-50A0A0B4J1J0 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Igkv4-50A0A0B4J1J0 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Igkv4-50A0A0B4J1J0 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Igkv4-50A0A0B4J1J0 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
Igkv4-50A0A0B4J1J0 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC18.82■□□□□ 0.6
Igkv4-50A0A0B4J1J0 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Igkv4-50A0A0B4J1J0 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Igkv4-50A0A0B4J1J0 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC18.82■□□□□ 0.6
Igkv4-50A0A0B4J1J0 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Igkv4-50A0A0B4J1J0 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Igkv4-50A0A0B4J1J0 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC18.81■□□□□ 0.6
Igkv4-50A0A0B4J1J0 Terc-201ENSMUST00000082862 423 ntBASIC18.81■□□□□ 0.6
Igkv4-50A0A0B4J1J0 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Igkv4-50A0A0B4J1J0 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Igkv4-50A0A0B4J1J0 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Igkv4-50A0A0B4J1J0 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Igkv4-50A0A0B4J1J0 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Igkv4-50A0A0B4J1J0 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Igkv4-50A0A0B4J1J0 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Igkv4-50A0A0B4J1J0 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Igkv4-50A0A0B4J1J0 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Igkv4-50A0A0B4J1J0 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Igkv4-50A0A0B4J1J0 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Igkv4-50A0A0B4J1J0 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Igkv4-50A0A0B4J1J0 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Igkv4-50A0A0B4J1J0 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Igkv4-50A0A0B4J1J0 H3f3aos-201ENSMUST00000097448 2905 ntBASIC18.78■□□□□ 0.6
Igkv4-50A0A0B4J1J0 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC18.78■□□□□ 0.6
Igkv4-50A0A0B4J1J0 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Igkv4-50A0A0B4J1J0 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Igkv4-50A0A0B4J1J0 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
Igkv4-50A0A0B4J1J0 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Igkv4-50A0A0B4J1J0 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Igkv4-50A0A0B4J1J0 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Igkv4-50A0A0B4J1J0 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Igkv4-50A0A0B4J1J0 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC18.77■□□□□ 0.6
Igkv4-50A0A0B4J1J0 Pkd1-207ENSMUST00000228550 1050 ntBASIC18.77■□□□□ 0.6
Igkv4-50A0A0B4J1J0 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Igkv4-50A0A0B4J1J0 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Igkv4-50A0A0B4J1J0 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Igkv4-50A0A0B4J1J0 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Igkv4-50A0A0B4J1J0 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Igkv4-50A0A0B4J1J0 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Igkv4-50A0A0B4J1J0 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Igkv4-50A0A0B4J1J0 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Igkv4-50A0A0B4J1J0 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
Igkv4-50A0A0B4J1J0 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Igkv4-50A0A0B4J1J0 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Igkv4-50A0A0B4J1J0 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Igkv4-50A0A0B4J1J0 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms