Protein–RNA interactions for Protein: A0A0A6YY83

Pcdh7, Protocadherin 7, mousemouse

Predictions only

Length 1,255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh7A0A0A6YY83 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Pcdh7A0A0A6YY83 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
Pcdh7A0A0A6YY83 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Pcdh7A0A0A6YY83 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC23.3■■□□□ 1.32
Pcdh7A0A0A6YY83 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Pcdh7A0A0A6YY83 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Pcdh7A0A0A6YY83 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Pcdh7A0A0A6YY83 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC23.29■■□□□ 1.32
Pcdh7A0A0A6YY83 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
Pcdh7A0A0A6YY83 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
Pcdh7A0A0A6YY83 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Pcdh7A0A0A6YY83 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Pcdh7A0A0A6YY83 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Pcdh7A0A0A6YY83 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Pcdh7A0A0A6YY83 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
Pcdh7A0A0A6YY83 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Pcdh7A0A0A6YY83 Gm9910-201ENSMUST00000195385 1550 ntBASIC23.27■■□□□ 1.32
Pcdh7A0A0A6YY83 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Pcdh7A0A0A6YY83 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
Pcdh7A0A0A6YY83 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Pcdh7A0A0A6YY83 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Pcdh7A0A0A6YY83 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Pcdh7A0A0A6YY83 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
Pcdh7A0A0A6YY83 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC23.25■■□□□ 1.31
Pcdh7A0A0A6YY83 Gm5987-201ENSMUST00000196433 1151 ntBASIC23.25■■□□□ 1.31
Pcdh7A0A0A6YY83 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Pcdh7A0A0A6YY83 Il17rd-202ENSMUST00000223942 2186 ntBASIC23.25■■□□□ 1.31
Pcdh7A0A0A6YY83 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Pcdh7A0A0A6YY83 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Pcdh7A0A0A6YY83 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Pcdh7A0A0A6YY83 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Pcdh7A0A0A6YY83 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Pcdh7A0A0A6YY83 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Pcdh7A0A0A6YY83 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Pcdh7A0A0A6YY83 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC23.24■■□□□ 1.31
Pcdh7A0A0A6YY83 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Pcdh7A0A0A6YY83 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Pcdh7A0A0A6YY83 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
Pcdh7A0A0A6YY83 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
Pcdh7A0A0A6YY83 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Pcdh7A0A0A6YY83 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Pcdh7A0A0A6YY83 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Pcdh7A0A0A6YY83 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Pcdh7A0A0A6YY83 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC23.23■■□□□ 1.31
Pcdh7A0A0A6YY83 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Pcdh7A0A0A6YY83 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Pcdh7A0A0A6YY83 AC164433.2-201ENSMUST00000226346 1701 ntBASIC23.22■■□□□ 1.31
Pcdh7A0A0A6YY83 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC23.22■■□□□ 1.31
Pcdh7A0A0A6YY83 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Pcdh7A0A0A6YY83 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Pcdh7A0A0A6YY83 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Pcdh7A0A0A6YY83 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Pcdh7A0A0A6YY83 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Pcdh7A0A0A6YY83 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Pcdh7A0A0A6YY83 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Pcdh7A0A0A6YY83 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Pcdh7A0A0A6YY83 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Pcdh7A0A0A6YY83 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Pcdh7A0A0A6YY83 Gm9806-201ENSMUST00000051080 552 ntBASIC23.2■■□□□ 1.3
Pcdh7A0A0A6YY83 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
Pcdh7A0A0A6YY83 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Pcdh7A0A0A6YY83 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC23.19■■□□□ 1.3
Pcdh7A0A0A6YY83 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC23.19■■□□□ 1.3
Pcdh7A0A0A6YY83 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC23.19■■□□□ 1.3
Pcdh7A0A0A6YY83 Scarna2-201ENSMUST00000157560 414 ntBASIC23.19■■□□□ 1.3
Pcdh7A0A0A6YY83 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Pcdh7A0A0A6YY83 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Pcdh7A0A0A6YY83 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC23.17■■□□□ 1.3
Pcdh7A0A0A6YY83 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Pcdh7A0A0A6YY83 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC23.17■■□□□ 1.3
Pcdh7A0A0A6YY83 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Pcdh7A0A0A6YY83 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Pcdh7A0A0A6YY83 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Pcdh7A0A0A6YY83 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
Pcdh7A0A0A6YY83 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC23.15■■□□□ 1.3
Pcdh7A0A0A6YY83 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Pcdh7A0A0A6YY83 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Pcdh7A0A0A6YY83 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Pcdh7A0A0A6YY83 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Pcdh7A0A0A6YY83 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
Pcdh7A0A0A6YY83 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Pcdh7A0A0A6YY83 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Pcdh7A0A0A6YY83 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Pcdh7A0A0A6YY83 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Pcdh7A0A0A6YY83 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
Pcdh7A0A0A6YY83 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
Pcdh7A0A0A6YY83 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Pcdh7A0A0A6YY83 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Pcdh7A0A0A6YY83 Gm11687-201ENSMUST00000118911 886 ntBASIC23.12■■□□□ 1.29
Pcdh7A0A0A6YY83 Gm16437-201ENSMUST00000025669 507 ntBASIC23.12■■□□□ 1.29
Pcdh7A0A0A6YY83 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC23.12■■□□□ 1.29
Pcdh7A0A0A6YY83 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Pcdh7A0A0A6YY83 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Pcdh7A0A0A6YY83 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Pcdh7A0A0A6YY83 Gm7199-201ENSMUST00000118327 1485 ntBASIC23.11■■□□□ 1.29
Pcdh7A0A0A6YY83 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Pcdh7A0A0A6YY83 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
Pcdh7A0A0A6YY83 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
Pcdh7A0A0A6YY83 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC23.09■■□□□ 1.29
Pcdh7A0A0A6YY83 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms