Protein–RNA interactions for Protein: A0A0A6YWX2

Ighv1-49, Immunoglobulin heavy variable 1-49 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-49A0A0A6YWX2 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ighv1-49A0A0A6YWX2 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ighv1-49A0A0A6YWX2 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ighv1-49A0A0A6YWX2 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ighv1-49A0A0A6YWX2 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Ighv1-49A0A0A6YWX2 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ighv1-49A0A0A6YWX2 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ighv1-49A0A0A6YWX2 Gm14121-201ENSMUST00000121441 1380 ntBASIC15.94■□□□□ 0.14
Ighv1-49A0A0A6YWX2 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ighv1-49A0A0A6YWX2 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ighv1-49A0A0A6YWX2 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ighv1-49A0A0A6YWX2 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Ighv1-49A0A0A6YWX2 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Ighv1-49A0A0A6YWX2 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC15.93■□□□□ 0.14
Ighv1-49A0A0A6YWX2 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Ighv1-49A0A0A6YWX2 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ighv1-49A0A0A6YWX2 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Ighv1-49A0A0A6YWX2 Il17rd-202ENSMUST00000223942 2186 ntBASIC15.92■□□□□ 0.14
Ighv1-49A0A0A6YWX2 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Ighv1-49A0A0A6YWX2 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Ighv1-49A0A0A6YWX2 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Ighv1-49A0A0A6YWX2 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ighv1-49A0A0A6YWX2 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ighv1-49A0A0A6YWX2 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ighv1-49A0A0A6YWX2 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC15.91■□□□□ 0.14
Ighv1-49A0A0A6YWX2 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ighv1-49A0A0A6YWX2 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ighv1-49A0A0A6YWX2 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ighv1-49A0A0A6YWX2 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Ighv1-49A0A0A6YWX2 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Ighv1-49A0A0A6YWX2 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ighv1-49A0A0A6YWX2 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ighv1-49A0A0A6YWX2 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ighv1-49A0A0A6YWX2 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ighv1-49A0A0A6YWX2 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ighv1-49A0A0A6YWX2 Gm37136-201ENSMUST00000194368 194 ntBASIC15.89■□□□□ 0.13
Ighv1-49A0A0A6YWX2 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ighv1-49A0A0A6YWX2 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Ighv1-49A0A0A6YWX2 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Ighv1-49A0A0A6YWX2 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ighv1-49A0A0A6YWX2 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC15.88■□□□□ 0.13
Ighv1-49A0A0A6YWX2 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Ighv1-49A0A0A6YWX2 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ighv1-49A0A0A6YWX2 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ighv1-49A0A0A6YWX2 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
Ighv1-49A0A0A6YWX2 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ighv1-49A0A0A6YWX2 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ighv1-49A0A0A6YWX2 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC15.87■□□□□ 0.13
Ighv1-49A0A0A6YWX2 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Ighv1-49A0A0A6YWX2 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Ighv1-49A0A0A6YWX2 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC15.86■□□□□ 0.13
Ighv1-49A0A0A6YWX2 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ighv1-49A0A0A6YWX2 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ighv1-49A0A0A6YWX2 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Ighv1-49A0A0A6YWX2 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC15.86■□□□□ 0.13
Ighv1-49A0A0A6YWX2 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ighv1-49A0A0A6YWX2 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Ighv1-49A0A0A6YWX2 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ighv1-49A0A0A6YWX2 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Ighv1-49A0A0A6YWX2 Gm4419-202ENSMUST00000226239 1431 ntBASIC15.85■□□□□ 0.13
Ighv1-49A0A0A6YWX2 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ighv1-49A0A0A6YWX2 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ighv1-49A0A0A6YWX2 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Ighv1-49A0A0A6YWX2 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ighv1-49A0A0A6YWX2 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ighv1-49A0A0A6YWX2 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ighv1-49A0A0A6YWX2 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ighv1-49A0A0A6YWX2 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Ighv1-49A0A0A6YWX2 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ighv1-49A0A0A6YWX2 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Ighv1-49A0A0A6YWX2 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ighv1-49A0A0A6YWX2 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC15.85■□□□□ 0.13
Ighv1-49A0A0A6YWX2 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ighv1-49A0A0A6YWX2 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Ighv1-49A0A0A6YWX2 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ighv1-49A0A0A6YWX2 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ighv1-49A0A0A6YWX2 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ighv1-49A0A0A6YWX2 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Ighv1-49A0A0A6YWX2 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ighv1-49A0A0A6YWX2 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Ighv1-49A0A0A6YWX2 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Ighv1-49A0A0A6YWX2 Gm8503-201ENSMUST00000118131 455 ntBASIC15.83■□□□□ 0.12
Ighv1-49A0A0A6YWX2 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC15.83■□□□□ 0.12
Ighv1-49A0A0A6YWX2 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ighv1-49A0A0A6YWX2 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ighv1-49A0A0A6YWX2 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ighv1-49A0A0A6YWX2 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ighv1-49A0A0A6YWX2 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC15.82■□□□□ 0.12
Ighv1-49A0A0A6YWX2 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ighv1-49A0A0A6YWX2 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ighv1-49A0A0A6YWX2 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ighv1-49A0A0A6YWX2 Gm42699-201ENSMUST00000198104 1657 ntBASIC15.81■□□□□ 0.12
Ighv1-49A0A0A6YWX2 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ighv1-49A0A0A6YWX2 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ighv1-49A0A0A6YWX2 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ighv1-49A0A0A6YWX2 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ighv1-49A0A0A6YWX2 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ighv1-49A0A0A6YWX2 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ighv1-49A0A0A6YWX2 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ighv1-49A0A0A6YWX2 AC131739.1-201ENSMUST00000221692 1245 ntBASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms