Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.8■□□□□ 0.92
ClcnkaQ9WUB7 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ClcnkaQ9WUB7 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
ClcnkaQ9WUB7 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ClcnkaQ9WUB7 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
ClcnkaQ9WUB7 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.79■□□□□ 0.92
ClcnkaQ9WUB7 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ClcnkaQ9WUB7 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
ClcnkaQ9WUB7 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC20.78■□□□□ 0.92
ClcnkaQ9WUB7 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ClcnkaQ9WUB7 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ClcnkaQ9WUB7 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
ClcnkaQ9WUB7 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC20.77■□□□□ 0.92
ClcnkaQ9WUB7 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ClcnkaQ9WUB7 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.77■□□□□ 0.92
ClcnkaQ9WUB7 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
ClcnkaQ9WUB7 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ClcnkaQ9WUB7 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ClcnkaQ9WUB7 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ClcnkaQ9WUB7 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ClcnkaQ9WUB7 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
ClcnkaQ9WUB7 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
ClcnkaQ9WUB7 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ClcnkaQ9WUB7 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ClcnkaQ9WUB7 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
ClcnkaQ9WUB7 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
ClcnkaQ9WUB7 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
ClcnkaQ9WUB7 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
ClcnkaQ9WUB7 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC20.75■□□□□ 0.91
ClcnkaQ9WUB7 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
ClcnkaQ9WUB7 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ClcnkaQ9WUB7 Gm13889-201ENSMUST00000099689 1386 ntBASIC20.74■□□□□ 0.91
ClcnkaQ9WUB7 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ClcnkaQ9WUB7 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
ClcnkaQ9WUB7 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC20.74■□□□□ 0.91
ClcnkaQ9WUB7 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
ClcnkaQ9WUB7 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.73■□□□□ 0.91
ClcnkaQ9WUB7 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ClcnkaQ9WUB7 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ClcnkaQ9WUB7 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
ClcnkaQ9WUB7 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.73■□□□□ 0.91
ClcnkaQ9WUB7 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
ClcnkaQ9WUB7 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ClcnkaQ9WUB7 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
ClcnkaQ9WUB7 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
ClcnkaQ9WUB7 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
ClcnkaQ9WUB7 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ClcnkaQ9WUB7 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
ClcnkaQ9WUB7 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.7■□□□□ 0.9
ClcnkaQ9WUB7 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ClcnkaQ9WUB7 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
ClcnkaQ9WUB7 Mir3960-201ENSMUST00000198213 73 ntBASIC20.7■□□□□ 0.9
ClcnkaQ9WUB7 AC167019.3-201ENSMUST00000228225 1266 ntBASIC20.7■□□□□ 0.9
ClcnkaQ9WUB7 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
ClcnkaQ9WUB7 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ClcnkaQ9WUB7 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.7■□□□□ 0.9
ClcnkaQ9WUB7 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ClcnkaQ9WUB7 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
ClcnkaQ9WUB7 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ClcnkaQ9WUB7 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.69■□□□□ 0.9
ClcnkaQ9WUB7 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ClcnkaQ9WUB7 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ClcnkaQ9WUB7 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC20.69■□□□□ 0.9
ClcnkaQ9WUB7 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ClcnkaQ9WUB7 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
ClcnkaQ9WUB7 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ClcnkaQ9WUB7 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
ClcnkaQ9WUB7 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ClcnkaQ9WUB7 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ClcnkaQ9WUB7 AC154454.1-201ENSMUST00000225253 216 ntBASIC20.67■□□□□ 0.9
ClcnkaQ9WUB7 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ClcnkaQ9WUB7 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
ClcnkaQ9WUB7 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
ClcnkaQ9WUB7 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ClcnkaQ9WUB7 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
ClcnkaQ9WUB7 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
ClcnkaQ9WUB7 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.65■□□□□ 0.9
ClcnkaQ9WUB7 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
ClcnkaQ9WUB7 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
ClcnkaQ9WUB7 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
ClcnkaQ9WUB7 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ClcnkaQ9WUB7 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ClcnkaQ9WUB7 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
ClcnkaQ9WUB7 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC20.63■□□□□ 0.89
ClcnkaQ9WUB7 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ClcnkaQ9WUB7 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC20.63■□□□□ 0.89
ClcnkaQ9WUB7 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ClcnkaQ9WUB7 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ClcnkaQ9WUB7 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20.63■□□□□ 0.89
ClcnkaQ9WUB7 Gm45364-201ENSMUST00000210883 159 ntBASIC20.63■□□□□ 0.89
ClcnkaQ9WUB7 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
ClcnkaQ9WUB7 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ClcnkaQ9WUB7 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ClcnkaQ9WUB7 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
ClcnkaQ9WUB7 Gm12818-201ENSMUST00000117562 1349 ntBASIC20.6■□□□□ 0.89
ClcnkaQ9WUB7 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.6■□□□□ 0.89
ClcnkaQ9WUB7 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ClcnkaQ9WUB7 Gm9812-201ENSMUST00000061934 968 ntBASIC20.6■□□□□ 0.89
ClcnkaQ9WUB7 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.6■□□□□ 0.89
ClcnkaQ9WUB7 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms