Protein–RNA interactions for Protein: Q9D7S1

Tmem54, Transmembrane protein 54, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem54Q9D7S1 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Tmem54Q9D7S1 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC19.97■□□□□ 0.79
Tmem54Q9D7S1 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Tmem54Q9D7S1 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Tmem54Q9D7S1 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Tmem54Q9D7S1 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.96■□□□□ 0.79
Tmem54Q9D7S1 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Tmem54Q9D7S1 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC19.95■□□□□ 0.78
Tmem54Q9D7S1 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Tmem54Q9D7S1 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
Tmem54Q9D7S1 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Tmem54Q9D7S1 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC19.94■□□□□ 0.78
Tmem54Q9D7S1 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Tmem54Q9D7S1 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Tmem54Q9D7S1 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Tmem54Q9D7S1 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Tmem54Q9D7S1 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC19.93■□□□□ 0.78
Tmem54Q9D7S1 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Tmem54Q9D7S1 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC19.93■□□□□ 0.78
Tmem54Q9D7S1 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Tmem54Q9D7S1 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Tmem54Q9D7S1 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Tmem54Q9D7S1 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC19.93■□□□□ 0.78
Tmem54Q9D7S1 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Tmem54Q9D7S1 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Tmem54Q9D7S1 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Tmem54Q9D7S1 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Tmem54Q9D7S1 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC19.92■□□□□ 0.78
Tmem54Q9D7S1 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Tmem54Q9D7S1 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Tmem54Q9D7S1 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Tmem54Q9D7S1 Scarna2-201ENSMUST00000157560 414 ntBASIC19.91■□□□□ 0.78
Tmem54Q9D7S1 Terc-201ENSMUST00000082862 423 ntBASIC19.91■□□□□ 0.78
Tmem54Q9D7S1 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Tmem54Q9D7S1 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Tmem54Q9D7S1 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Tmem54Q9D7S1 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC19.9■□□□□ 0.78
Tmem54Q9D7S1 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Tmem54Q9D7S1 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Tmem54Q9D7S1 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tmem54Q9D7S1 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tmem54Q9D7S1 Gm9806-201ENSMUST00000051080 552 ntBASIC19.88■□□□□ 0.77
Tmem54Q9D7S1 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Tmem54Q9D7S1 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Tmem54Q9D7S1 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tmem54Q9D7S1 Gm9910-201ENSMUST00000195385 1550 ntBASIC19.87■□□□□ 0.77
Tmem54Q9D7S1 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tmem54Q9D7S1 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tmem54Q9D7S1 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Tmem54Q9D7S1 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Tmem54Q9D7S1 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Tmem54Q9D7S1 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC19.87■□□□□ 0.77
Tmem54Q9D7S1 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tmem54Q9D7S1 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC19.86■□□□□ 0.77
Tmem54Q9D7S1 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tmem54Q9D7S1 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tmem54Q9D7S1 Gm11175-201ENSMUST00000116172 543 ntBASIC19.86■□□□□ 0.77
Tmem54Q9D7S1 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Tmem54Q9D7S1 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Tmem54Q9D7S1 Gm16437-201ENSMUST00000025669 507 ntBASIC19.85■□□□□ 0.77
Tmem54Q9D7S1 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Tmem54Q9D7S1 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Tmem54Q9D7S1 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Tmem54Q9D7S1 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Tmem54Q9D7S1 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Tmem54Q9D7S1 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
Tmem54Q9D7S1 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tmem54Q9D7S1 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC19.84■□□□□ 0.77
Tmem54Q9D7S1 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Tmem54Q9D7S1 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC19.84■□□□□ 0.77
Tmem54Q9D7S1 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Tmem54Q9D7S1 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tmem54Q9D7S1 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tmem54Q9D7S1 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Tmem54Q9D7S1 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Tmem54Q9D7S1 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Tmem54Q9D7S1 Gm11687-201ENSMUST00000118911 886 ntBASIC19.82■□□□□ 0.76
Tmem54Q9D7S1 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Tmem54Q9D7S1 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Tmem54Q9D7S1 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Tmem54Q9D7S1 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Tmem54Q9D7S1 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Tmem54Q9D7S1 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Tmem54Q9D7S1 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC19.81■□□□□ 0.76
Tmem54Q9D7S1 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Tmem54Q9D7S1 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Tmem54Q9D7S1 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Tmem54Q9D7S1 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tmem54Q9D7S1 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Tmem54Q9D7S1 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tmem54Q9D7S1 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
Tmem54Q9D7S1 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Tmem54Q9D7S1 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC19.79■□□□□ 0.76
Tmem54Q9D7S1 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tmem54Q9D7S1 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tmem54Q9D7S1 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tmem54Q9D7S1 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Tmem54Q9D7S1 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Tmem54Q9D7S1 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Tmem54Q9D7S1 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 10.7 ms