Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC25.62■■□□□ 1.69
Lysmd1Q9D0E3 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC25.61■■□□□ 1.69
Lysmd1Q9D0E3 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC25.61■■□□□ 1.69
Lysmd1Q9D0E3 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Lysmd1Q9D0E3 Terc-201ENSMUST00000082862 423 ntBASIC25.61■■□□□ 1.69
Lysmd1Q9D0E3 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Lysmd1Q9D0E3 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC25.6■■□□□ 1.69
Lysmd1Q9D0E3 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
Lysmd1Q9D0E3 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC25.6■■□□□ 1.69
Lysmd1Q9D0E3 Gm21956-201ENSMUST00000179946 522 ntBASIC25.59■■□□□ 1.69
Lysmd1Q9D0E3 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
Lysmd1Q9D0E3 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC25.58■■□□□ 1.69
Lysmd1Q9D0E3 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
Lysmd1Q9D0E3 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
Lysmd1Q9D0E3 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
Lysmd1Q9D0E3 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC25.56■■□□□ 1.68
Lysmd1Q9D0E3 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Lysmd1Q9D0E3 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Lysmd1Q9D0E3 Gm9847-201ENSMUST00000052528 599 ntBASIC25.55■■□□□ 1.68
Lysmd1Q9D0E3 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Lysmd1Q9D0E3 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Lysmd1Q9D0E3 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Lysmd1Q9D0E3 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Lysmd1Q9D0E3 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Lysmd1Q9D0E3 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Lysmd1Q9D0E3 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC25.53■■□□□ 1.68
Lysmd1Q9D0E3 Gm29257-201ENSMUST00000186115 639 ntBASIC25.53■■□□□ 1.68
Lysmd1Q9D0E3 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Lysmd1Q9D0E3 Gm9905-201ENSMUST00000065740 1845 ntBASIC25.53■■□□□ 1.68
Lysmd1Q9D0E3 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Lysmd1Q9D0E3 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Lysmd1Q9D0E3 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Lysmd1Q9D0E3 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Lysmd1Q9D0E3 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC25.51■■□□□ 1.67
Lysmd1Q9D0E3 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Lysmd1Q9D0E3 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC25.51■■□□□ 1.67
Lysmd1Q9D0E3 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC25.51■■□□□ 1.67
Lysmd1Q9D0E3 Gm44428-201ENSMUST00000204474 874 ntBASIC25.5■■□□□ 1.67
Lysmd1Q9D0E3 Gm10232-201ENSMUST00000089221 720 ntBASIC25.5■■□□□ 1.67
Lysmd1Q9D0E3 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC25.49■■□□□ 1.67
Lysmd1Q9D0E3 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC25.48■■□□□ 1.67
Lysmd1Q9D0E3 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC25.48■■□□□ 1.67
Lysmd1Q9D0E3 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC25.48■■□□□ 1.67
Lysmd1Q9D0E3 Spcs1-207ENSMUST00000228767 1008 ntBASIC25.48■■□□□ 1.67
Lysmd1Q9D0E3 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Lysmd1Q9D0E3 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC25.47■■□□□ 1.67
Lysmd1Q9D0E3 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
Lysmd1Q9D0E3 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC25.47■■□□□ 1.67
Lysmd1Q9D0E3 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Lysmd1Q9D0E3 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC25.45■■□□□ 1.67
Lysmd1Q9D0E3 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
Lysmd1Q9D0E3 Gm37847-201ENSMUST00000192163 1497 ntBASIC25.45■■□□□ 1.66
Lysmd1Q9D0E3 Gm31748-201ENSMUST00000194938 1497 ntBASIC25.45■■□□□ 1.66
Lysmd1Q9D0E3 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Lysmd1Q9D0E3 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC25.43■■□□□ 1.66
Lysmd1Q9D0E3 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC25.43■■□□□ 1.66
Lysmd1Q9D0E3 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC25.43■■□□□ 1.66
Lysmd1Q9D0E3 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
Lysmd1Q9D0E3 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Lysmd1Q9D0E3 Gm8495-201ENSMUST00000188740 694 ntBASIC25.42■■□□□ 1.66
Lysmd1Q9D0E3 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Lysmd1Q9D0E3 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Lysmd1Q9D0E3 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Lysmd1Q9D0E3 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC25.41■■□□□ 1.66
Lysmd1Q9D0E3 Appbp2os-202ENSMUST00000206972 447 ntBASIC25.41■■□□□ 1.66
Lysmd1Q9D0E3 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Lysmd1Q9D0E3 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC25.4■■□□□ 1.66
Lysmd1Q9D0E3 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC25.4■■□□□ 1.66
Lysmd1Q9D0E3 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Lysmd1Q9D0E3 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Lysmd1Q9D0E3 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Lysmd1Q9D0E3 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Lysmd1Q9D0E3 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Lysmd1Q9D0E3 Gm5131-201ENSMUST00000212776 1238 ntBASIC25.37■■□□□ 1.65
Lysmd1Q9D0E3 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC25.37■■□□□ 1.65
Lysmd1Q9D0E3 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC25.36■■□□□ 1.65
Lysmd1Q9D0E3 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC25.36■■□□□ 1.65
Lysmd1Q9D0E3 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC25.36■■□□□ 1.65
Lysmd1Q9D0E3 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC25.36■■□□□ 1.65
Lysmd1Q9D0E3 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Lysmd1Q9D0E3 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Lysmd1Q9D0E3 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Lysmd1Q9D0E3 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Lysmd1Q9D0E3 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC25.34■■□□□ 1.65
Lysmd1Q9D0E3 Gm7417-201ENSMUST00000192950 473 ntBASIC25.34■■□□□ 1.65
Lysmd1Q9D0E3 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC25.34■■□□□ 1.65
Lysmd1Q9D0E3 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Lysmd1Q9D0E3 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Lysmd1Q9D0E3 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.65
Lysmd1Q9D0E3 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Lysmd1Q9D0E3 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC25.33■■□□□ 1.65
Lysmd1Q9D0E3 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC25.33■■□□□ 1.65
Lysmd1Q9D0E3 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Lysmd1Q9D0E3 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Lysmd1Q9D0E3 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
Lysmd1Q9D0E3 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Lysmd1Q9D0E3 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Lysmd1Q9D0E3 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC25.32■■□□□ 1.64
Lysmd1Q9D0E3 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Lysmd1Q9D0E3 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Retrieved 100 of 76,532 protein–RNA pairs in 274.1 ms