Protein–RNA interactions for Protein: Q9D032

Ssbp3, Single-stranded DNA-binding protein 3, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp3Q9D032 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ssbp3Q9D032 Gm4419-202ENSMUST00000226239 1431 ntBASIC18.83■□□□□ 0.6
Ssbp3Q9D032 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Ssbp3Q9D032 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Ssbp3Q9D032 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
Ssbp3Q9D032 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Ssbp3Q9D032 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Ssbp3Q9D032 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Ssbp3Q9D032 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ssbp3Q9D032 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ssbp3Q9D032 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Ssbp3Q9D032 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC18.81■□□□□ 0.6
Ssbp3Q9D032 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ssbp3Q9D032 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ssbp3Q9D032 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Ssbp3Q9D032 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ssbp3Q9D032 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC18.8■□□□□ 0.6
Ssbp3Q9D032 Terc-201ENSMUST00000082862 423 ntBASIC18.8■□□□□ 0.6
Ssbp3Q9D032 Cap2-205ENSMUST00000225824 1634 ntBASIC18.8■□□□□ 0.6
Ssbp3Q9D032 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ssbp3Q9D032 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ssbp3Q9D032 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ssbp3Q9D032 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ssbp3Q9D032 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ssbp3Q9D032 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ssbp3Q9D032 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ssbp3Q9D032 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ssbp3Q9D032 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC18.78■□□□□ 0.6
Ssbp3Q9D032 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ssbp3Q9D032 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ssbp3Q9D032 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ssbp3Q9D032 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ssbp3Q9D032 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ssbp3Q9D032 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC18.77■□□□□ 0.6
Ssbp3Q9D032 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ssbp3Q9D032 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ssbp3Q9D032 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ssbp3Q9D032 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ssbp3Q9D032 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC18.75■□□□□ 0.59
Ssbp3Q9D032 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ssbp3Q9D032 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ssbp3Q9D032 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC18.75■□□□□ 0.59
Ssbp3Q9D032 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ssbp3Q9D032 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ssbp3Q9D032 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC18.74■□□□□ 0.59
Ssbp3Q9D032 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ssbp3Q9D032 AC122428.3-201ENSMUST00000215551 2290 ntBASIC18.74■□□□□ 0.59
Ssbp3Q9D032 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Ssbp3Q9D032 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ssbp3Q9D032 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ssbp3Q9D032 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ssbp3Q9D032 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ssbp3Q9D032 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC18.73■□□□□ 0.59
Ssbp3Q9D032 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ssbp3Q9D032 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ssbp3Q9D032 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ssbp3Q9D032 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ssbp3Q9D032 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ssbp3Q9D032 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ssbp3Q9D032 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC18.71■□□□□ 0.59
Ssbp3Q9D032 Gm12366-201ENSMUST00000121722 873 ntBASIC18.71■□□□□ 0.59
Ssbp3Q9D032 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC18.71■□□□□ 0.59
Ssbp3Q9D032 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ssbp3Q9D032 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ssbp3Q9D032 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ssbp3Q9D032 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC18.71■□□□□ 0.59
Ssbp3Q9D032 Gm5786-201ENSMUST00000085368 882 ntBASIC18.71■□□□□ 0.59
Ssbp3Q9D032 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ssbp3Q9D032 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ssbp3Q9D032 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Ssbp3Q9D032 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ssbp3Q9D032 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ssbp3Q9D032 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ssbp3Q9D032 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ssbp3Q9D032 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ssbp3Q9D032 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Ssbp3Q9D032 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ssbp3Q9D032 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ssbp3Q9D032 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC18.69■□□□□ 0.58
Ssbp3Q9D032 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC18.69■□□□□ 0.58
Ssbp3Q9D032 Gm27502-201ENSMUST00000183495 199 ntBASIC18.69■□□□□ 0.58
Ssbp3Q9D032 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC18.69■□□□□ 0.58
Ssbp3Q9D032 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ssbp3Q9D032 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC18.69■□□□□ 0.58
Ssbp3Q9D032 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ssbp3Q9D032 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ssbp3Q9D032 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ssbp3Q9D032 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ssbp3Q9D032 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC18.68■□□□□ 0.58
Ssbp3Q9D032 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ssbp3Q9D032 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ssbp3Q9D032 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ssbp3Q9D032 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ssbp3Q9D032 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ssbp3Q9D032 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ssbp3Q9D032 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ssbp3Q9D032 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
Ssbp3Q9D032 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ssbp3Q9D032 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ssbp3Q9D032 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms