Protein–RNA interactions for Protein: Q9CR56

Nkiras2, NF-kappa-B inhibitor-interacting Ras-like protein 2, mousemouse

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkiras2Q9CR56 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nkiras2Q9CR56 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nkiras2Q9CR56 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
Nkiras2Q9CR56 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Nkiras2Q9CR56 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nkiras2Q9CR56 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Nkiras2Q9CR56 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Nkiras2Q9CR56 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC20.28■□□□□ 0.84
Nkiras2Q9CR56 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nkiras2Q9CR56 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nkiras2Q9CR56 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.28■□□□□ 0.84
Nkiras2Q9CR56 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nkiras2Q9CR56 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Nkiras2Q9CR56 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nkiras2Q9CR56 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
Nkiras2Q9CR56 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Nkiras2Q9CR56 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Nkiras2Q9CR56 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Nkiras2Q9CR56 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nkiras2Q9CR56 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nkiras2Q9CR56 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Nkiras2Q9CR56 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nkiras2Q9CR56 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nkiras2Q9CR56 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nkiras2Q9CR56 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.25■□□□□ 0.83
Nkiras2Q9CR56 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nkiras2Q9CR56 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nkiras2Q9CR56 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC20.25■□□□□ 0.83
Nkiras2Q9CR56 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Nkiras2Q9CR56 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nkiras2Q9CR56 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nkiras2Q9CR56 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Nkiras2Q9CR56 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
Nkiras2Q9CR56 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nkiras2Q9CR56 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nkiras2Q9CR56 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nkiras2Q9CR56 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nkiras2Q9CR56 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nkiras2Q9CR56 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Nkiras2Q9CR56 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC20.24■□□□□ 0.83
Nkiras2Q9CR56 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Nkiras2Q9CR56 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nkiras2Q9CR56 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Nkiras2Q9CR56 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.24■□□□□ 0.83
Nkiras2Q9CR56 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.23■□□□□ 0.83
Nkiras2Q9CR56 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC20.23■□□□□ 0.83
Nkiras2Q9CR56 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Nkiras2Q9CR56 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Nkiras2Q9CR56 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Nkiras2Q9CR56 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nkiras2Q9CR56 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.23■□□□□ 0.83
Nkiras2Q9CR56 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nkiras2Q9CR56 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC20.22■□□□□ 0.83
Nkiras2Q9CR56 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Nkiras2Q9CR56 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nkiras2Q9CR56 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Nkiras2Q9CR56 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nkiras2Q9CR56 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nkiras2Q9CR56 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nkiras2Q9CR56 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.21■□□□□ 0.83
Nkiras2Q9CR56 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nkiras2Q9CR56 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nkiras2Q9CR56 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Nkiras2Q9CR56 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nkiras2Q9CR56 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nkiras2Q9CR56 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Nkiras2Q9CR56 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Nkiras2Q9CR56 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nkiras2Q9CR56 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nkiras2Q9CR56 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Nkiras2Q9CR56 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Nkiras2Q9CR56 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.2■□□□□ 0.82
Nkiras2Q9CR56 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nkiras2Q9CR56 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC20.19■□□□□ 0.82
Nkiras2Q9CR56 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
Nkiras2Q9CR56 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Nkiras2Q9CR56 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.18■□□□□ 0.82
Nkiras2Q9CR56 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nkiras2Q9CR56 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Nkiras2Q9CR56 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nkiras2Q9CR56 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Nkiras2Q9CR56 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Nkiras2Q9CR56 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Nkiras2Q9CR56 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nkiras2Q9CR56 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Nkiras2Q9CR56 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nkiras2Q9CR56 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Nkiras2Q9CR56 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Nkiras2Q9CR56 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nkiras2Q9CR56 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Nkiras2Q9CR56 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
Nkiras2Q9CR56 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Nkiras2Q9CR56 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nkiras2Q9CR56 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Nkiras2Q9CR56 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nkiras2Q9CR56 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Nkiras2Q9CR56 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nkiras2Q9CR56 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nkiras2Q9CR56 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Nkiras2Q9CR56 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.13■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms