Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC27.03■■□□□ 1.92
Pcdh15Q99PJ1 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Pcdh15Q99PJ1 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Pcdh15Q99PJ1 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Pcdh15Q99PJ1 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
Pcdh15Q99PJ1 Gm44428-201ENSMUST00000204474 874 ntBASIC27.02■■□□□ 1.92
Pcdh15Q99PJ1 Gm45444-201ENSMUST00000211394 898 ntBASIC27.02■■□□□ 1.92
Pcdh15Q99PJ1 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC27.01■■□□□ 1.91
Pcdh15Q99PJ1 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Pcdh15Q99PJ1 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC27.01■■□□□ 1.91
Pcdh15Q99PJ1 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC27.01■■□□□ 1.91
Pcdh15Q99PJ1 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC27■■□□□ 1.91
Pcdh15Q99PJ1 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC27■■□□□ 1.91
Pcdh15Q99PJ1 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Pcdh15Q99PJ1 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
Pcdh15Q99PJ1 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Pcdh15Q99PJ1 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Pcdh15Q99PJ1 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Pcdh15Q99PJ1 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
Pcdh15Q99PJ1 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC26.98■■□□□ 1.91
Pcdh15Q99PJ1 Gm45102-201ENSMUST00000207427 857 ntBASIC26.98■■□□□ 1.91
Pcdh15Q99PJ1 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC26.97■■□□□ 1.91
Pcdh15Q99PJ1 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
Pcdh15Q99PJ1 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC26.96■■□□□ 1.91
Pcdh15Q99PJ1 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
Pcdh15Q99PJ1 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
Pcdh15Q99PJ1 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC26.95■■□□□ 1.9
Pcdh15Q99PJ1 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC26.95■■□□□ 1.9
Pcdh15Q99PJ1 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC26.95■■□□□ 1.9
Pcdh15Q99PJ1 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Pcdh15Q99PJ1 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Pcdh15Q99PJ1 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC26.93■■□□□ 1.9
Pcdh15Q99PJ1 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Pcdh15Q99PJ1 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Pcdh15Q99PJ1 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Pcdh15Q99PJ1 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
Pcdh15Q99PJ1 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Pcdh15Q99PJ1 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Pcdh15Q99PJ1 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC26.89■■□□□ 1.9
Pcdh15Q99PJ1 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Pcdh15Q99PJ1 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Pcdh15Q99PJ1 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Pcdh15Q99PJ1 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC26.87■■□□□ 1.89
Pcdh15Q99PJ1 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
Pcdh15Q99PJ1 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
Pcdh15Q99PJ1 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Pcdh15Q99PJ1 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC26.86■■□□□ 1.89
Pcdh15Q99PJ1 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC26.86■■□□□ 1.89
Pcdh15Q99PJ1 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC26.85■■□□□ 1.89
Pcdh15Q99PJ1 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC26.85■■□□□ 1.89
Pcdh15Q99PJ1 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Pcdh15Q99PJ1 Gm9959-201ENSMUST00000068277 390 ntBASIC26.84■■□□□ 1.89
Pcdh15Q99PJ1 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC26.84■■□□□ 1.89
Pcdh15Q99PJ1 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC26.84■■□□□ 1.89
Pcdh15Q99PJ1 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
Pcdh15Q99PJ1 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC26.84■■□□□ 1.89
Pcdh15Q99PJ1 Nsd1-203ENSMUST00000224156 1149 ntBASIC26.84■■□□□ 1.89
Pcdh15Q99PJ1 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC26.84■■□□□ 1.89
Pcdh15Q99PJ1 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC26.83■■□□□ 1.89
Pcdh15Q99PJ1 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC26.83■■□□□ 1.89
Pcdh15Q99PJ1 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC26.82■■□□□ 1.88
Pcdh15Q99PJ1 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Pcdh15Q99PJ1 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Pcdh15Q99PJ1 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Pcdh15Q99PJ1 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC26.8■■□□□ 1.88
Pcdh15Q99PJ1 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
Pcdh15Q99PJ1 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC26.8■■□□□ 1.88
Pcdh15Q99PJ1 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Pcdh15Q99PJ1 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC26.8■■□□□ 1.88
Pcdh15Q99PJ1 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC26.79■■□□□ 1.88
Pcdh15Q99PJ1 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC26.78■■□□□ 1.88
Pcdh15Q99PJ1 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC26.78■■□□□ 1.88
Pcdh15Q99PJ1 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC26.78■■□□□ 1.88
Pcdh15Q99PJ1 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Pcdh15Q99PJ1 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC26.77■■□□□ 1.88
Pcdh15Q99PJ1 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC26.77■■□□□ 1.88
Pcdh15Q99PJ1 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Pcdh15Q99PJ1 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Pcdh15Q99PJ1 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
Pcdh15Q99PJ1 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC26.75■■□□□ 1.87
Pcdh15Q99PJ1 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC26.75■■□□□ 1.87
Pcdh15Q99PJ1 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Pcdh15Q99PJ1 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Pcdh15Q99PJ1 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Pcdh15Q99PJ1 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC26.74■■□□□ 1.87
Pcdh15Q99PJ1 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Pcdh15Q99PJ1 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Pcdh15Q99PJ1 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC26.73■■□□□ 1.87
Pcdh15Q99PJ1 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC26.73■■□□□ 1.87
Pcdh15Q99PJ1 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC26.73■■□□□ 1.87
Pcdh15Q99PJ1 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC26.73■■□□□ 1.87
Pcdh15Q99PJ1 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Pcdh15Q99PJ1 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC26.73■■□□□ 1.87
Pcdh15Q99PJ1 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Pcdh15Q99PJ1 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC26.71■■□□□ 1.87
Pcdh15Q99PJ1 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Pcdh15Q99PJ1 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC26.71■■□□□ 1.87
Pcdh15Q99PJ1 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Pcdh15Q99PJ1 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Pcdh15Q99PJ1 Gm43445-201ENSMUST00000198564 2091 ntBASIC26.69■■□□□ 1.86
Retrieved 100 of 76,532 protein–RNA pairs in 91.2 ms