Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhga3Q91XY5 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhga3Q91XY5 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.05■□□□□ 0.8
Pcdhga3Q91XY5 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Pcdhga3Q91XY5 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhga3Q91XY5 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhga3Q91XY5 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhga3Q91XY5 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhga3Q91XY5 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhga3Q91XY5 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Pcdhga3Q91XY5 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhga3Q91XY5 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhga3Q91XY5 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhga3Q91XY5 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdhga3Q91XY5 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdhga3Q91XY5 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Pcdhga3Q91XY5 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Pcdhga3Q91XY5 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.01■□□□□ 0.79
Pcdhga3Q91XY5 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdhga3Q91XY5 Gm11599-201ENSMUST00000118720 878 ntBASIC20■□□□□ 0.79
Pcdhga3Q91XY5 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20■□□□□ 0.79
Pcdhga3Q91XY5 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdhga3Q91XY5 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhga3Q91XY5 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhga3Q91XY5 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhga3Q91XY5 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhga3Q91XY5 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhga3Q91XY5 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Pcdhga3Q91XY5 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhga3Q91XY5 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdhga3Q91XY5 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdhga3Q91XY5 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdhga3Q91XY5 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdhga3Q91XY5 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdhga3Q91XY5 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdhga3Q91XY5 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdhga3Q91XY5 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdhga3Q91XY5 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdhga3Q91XY5 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdhga3Q91XY5 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdhga3Q91XY5 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdhga3Q91XY5 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdhga3Q91XY5 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdhga3Q91XY5 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdhga3Q91XY5 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdhga3Q91XY5 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdhga3Q91XY5 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdhga3Q91XY5 Gm4419-202ENSMUST00000226239 1431 ntBASIC19.95■□□□□ 0.78
Pcdhga3Q91XY5 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdhga3Q91XY5 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
Pcdhga3Q91XY5 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdhga3Q91XY5 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.95■□□□□ 0.78
Pcdhga3Q91XY5 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdhga3Q91XY5 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.94■□□□□ 0.78
Pcdhga3Q91XY5 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Pcdhga3Q91XY5 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC19.93■□□□□ 0.78
Pcdhga3Q91XY5 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pcdhga3Q91XY5 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pcdhga3Q91XY5 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pcdhga3Q91XY5 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pcdhga3Q91XY5 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdhga3Q91XY5 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdhga3Q91XY5 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdhga3Q91XY5 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdhga3Q91XY5 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Pcdhga3Q91XY5 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdhga3Q91XY5 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdhga3Q91XY5 Gm4799-201ENSMUST00000095396 657 ntBASIC19.91■□□□□ 0.78
Pcdhga3Q91XY5 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhga3Q91XY5 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC19.9■□□□□ 0.78
Pcdhga3Q91XY5 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhga3Q91XY5 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhga3Q91XY5 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhga3Q91XY5 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
Pcdhga3Q91XY5 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC19.89■□□□□ 0.77
Pcdhga3Q91XY5 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdhga3Q91XY5 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdhga3Q91XY5 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhga3Q91XY5 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Pcdhga3Q91XY5 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhga3Q91XY5 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC19.88■□□□□ 0.77
Pcdhga3Q91XY5 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhga3Q91XY5 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhga3Q91XY5 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhga3Q91XY5 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhga3Q91XY5 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhga3Q91XY5 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhga3Q91XY5 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC19.87■□□□□ 0.77
Pcdhga3Q91XY5 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhga3Q91XY5 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC19.87■□□□□ 0.77
Pcdhga3Q91XY5 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhga3Q91XY5 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhga3Q91XY5 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhga3Q91XY5 Gm13889-201ENSMUST00000099689 1386 ntBASIC19.85■□□□□ 0.77
Pcdhga3Q91XY5 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhga3Q91XY5 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhga3Q91XY5 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhga3Q91XY5 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhga3Q91XY5 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Pcdhga3Q91XY5 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC19.85■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms