Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Trim60Q8VI40 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
Trim60Q8VI40 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
Trim60Q8VI40 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
Trim60Q8VI40 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC23.45■■□□□ 1.34
Trim60Q8VI40 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Trim60Q8VI40 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Trim60Q8VI40 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC23.43■■□□□ 1.34
Trim60Q8VI40 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC23.43■■□□□ 1.34
Trim60Q8VI40 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Trim60Q8VI40 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Trim60Q8VI40 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC23.43■■□□□ 1.34
Trim60Q8VI40 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Trim60Q8VI40 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC23.42■■□□□ 1.34
Trim60Q8VI40 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Trim60Q8VI40 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC23.41■■□□□ 1.34
Trim60Q8VI40 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC23.4■■□□□ 1.34
Trim60Q8VI40 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Trim60Q8VI40 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC23.4■■□□□ 1.34
Trim60Q8VI40 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Trim60Q8VI40 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC23.39■■□□□ 1.34
Trim60Q8VI40 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Trim60Q8VI40 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC23.39■■□□□ 1.33
Trim60Q8VI40 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Trim60Q8VI40 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC23.39■■□□□ 1.33
Trim60Q8VI40 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Trim60Q8VI40 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Trim60Q8VI40 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Trim60Q8VI40 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
Trim60Q8VI40 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
Trim60Q8VI40 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC23.37■■□□□ 1.33
Trim60Q8VI40 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC23.37■■□□□ 1.33
Trim60Q8VI40 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Trim60Q8VI40 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
Trim60Q8VI40 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Trim60Q8VI40 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC23.36■■□□□ 1.33
Trim60Q8VI40 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC23.36■■□□□ 1.33
Trim60Q8VI40 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Trim60Q8VI40 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Trim60Q8VI40 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC23.35■■□□□ 1.33
Trim60Q8VI40 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC23.35■■□□□ 1.33
Trim60Q8VI40 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
Trim60Q8VI40 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Trim60Q8VI40 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Trim60Q8VI40 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Trim60Q8VI40 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Trim60Q8VI40 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Trim60Q8VI40 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
Trim60Q8VI40 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Trim60Q8VI40 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Trim60Q8VI40 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Trim60Q8VI40 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.32
Trim60Q8VI40 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Trim60Q8VI40 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC23.33■■□□□ 1.32
Trim60Q8VI40 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Trim60Q8VI40 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC23.31■■□□□ 1.32
Trim60Q8VI40 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC23.31■■□□□ 1.32
Trim60Q8VI40 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Trim60Q8VI40 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Trim60Q8VI40 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC23.3■■□□□ 1.32
Trim60Q8VI40 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Trim60Q8VI40 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Trim60Q8VI40 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Trim60Q8VI40 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Trim60Q8VI40 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
Trim60Q8VI40 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Trim60Q8VI40 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Trim60Q8VI40 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Trim60Q8VI40 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Trim60Q8VI40 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
Trim60Q8VI40 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC23.28■■□□□ 1.32
Trim60Q8VI40 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Trim60Q8VI40 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Trim60Q8VI40 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Trim60Q8VI40 Gm9939-201ENSMUST00000067161 1154 ntBASIC23.28■■□□□ 1.32
Trim60Q8VI40 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Trim60Q8VI40 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
Trim60Q8VI40 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Trim60Q8VI40 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Trim60Q8VI40 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Trim60Q8VI40 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC23.26■■□□□ 1.31
Trim60Q8VI40 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
Trim60Q8VI40 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Trim60Q8VI40 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC23.25■■□□□ 1.31
Trim60Q8VI40 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Trim60Q8VI40 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC23.25■■□□□ 1.31
Trim60Q8VI40 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Trim60Q8VI40 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Trim60Q8VI40 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Trim60Q8VI40 Gm6821-201ENSMUST00000107540 542 ntBASIC23.23■■□□□ 1.31
Trim60Q8VI40 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Trim60Q8VI40 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC23.23■■□□□ 1.31
Trim60Q8VI40 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Trim60Q8VI40 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Trim60Q8VI40 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Trim60Q8VI40 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Trim60Q8VI40 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
Trim60Q8VI40 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
Trim60Q8VI40 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Trim60Q8VI40 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms