Protein–RNA interactions for Protein: Q8VEK3

Hnrnpu, Heterogeneous nuclear ribonucleoprotein U, mousemouse

Known RBP Predictions only

Length 800 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HnrnpuQ8VEK3 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC28.3■■■□□ 2.12
HnrnpuQ8VEK3 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC28.3■■■□□ 2.12
HnrnpuQ8VEK3 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC28.3■■■□□ 2.12
HnrnpuQ8VEK3 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
HnrnpuQ8VEK3 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC28.29■■■□□ 2.12
HnrnpuQ8VEK3 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
HnrnpuQ8VEK3 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
HnrnpuQ8VEK3 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
HnrnpuQ8VEK3 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC28.28■■■□□ 2.12
HnrnpuQ8VEK3 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
HnrnpuQ8VEK3 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
HnrnpuQ8VEK3 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC28.26■■■□□ 2.12
HnrnpuQ8VEK3 Mir3960-201ENSMUST00000198213 73 ntBASIC28.26■■■□□ 2.11
HnrnpuQ8VEK3 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC28.25■■■□□ 2.11
HnrnpuQ8VEK3 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC28.24■■■□□ 2.11
HnrnpuQ8VEK3 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
HnrnpuQ8VEK3 AC154454.1-201ENSMUST00000225253 216 ntBASIC28.24■■■□□ 2.11
HnrnpuQ8VEK3 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
HnrnpuQ8VEK3 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
HnrnpuQ8VEK3 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
HnrnpuQ8VEK3 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC28.23■■■□□ 2.11
HnrnpuQ8VEK3 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC28.23■■■□□ 2.11
HnrnpuQ8VEK3 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
HnrnpuQ8VEK3 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC28.22■■■□□ 2.11
HnrnpuQ8VEK3 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
HnrnpuQ8VEK3 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC28.21■■■□□ 2.11
HnrnpuQ8VEK3 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC28.21■■■□□ 2.11
HnrnpuQ8VEK3 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC28.21■■■□□ 2.11
HnrnpuQ8VEK3 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC28.21■■■□□ 2.11
HnrnpuQ8VEK3 Gm9812-201ENSMUST00000061934 968 ntBASIC28.21■■■□□ 2.11
HnrnpuQ8VEK3 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
HnrnpuQ8VEK3 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
HnrnpuQ8VEK3 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
HnrnpuQ8VEK3 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
HnrnpuQ8VEK3 Gm12818-201ENSMUST00000117562 1349 ntBASIC28.18■■■□□ 2.1
HnrnpuQ8VEK3 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
HnrnpuQ8VEK3 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
HnrnpuQ8VEK3 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC28.18■■■□□ 2.1
HnrnpuQ8VEK3 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC28.18■■■□□ 2.1
HnrnpuQ8VEK3 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC28.18■■■□□ 2.1
HnrnpuQ8VEK3 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
HnrnpuQ8VEK3 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
HnrnpuQ8VEK3 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC28.17■■■□□ 2.1
HnrnpuQ8VEK3 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC28.16■■■□□ 2.1
HnrnpuQ8VEK3 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
HnrnpuQ8VEK3 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
HnrnpuQ8VEK3 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC28.15■■■□□ 2.1
HnrnpuQ8VEK3 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
HnrnpuQ8VEK3 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC28.15■■■□□ 2.1
HnrnpuQ8VEK3 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC28.15■■■□□ 2.1
HnrnpuQ8VEK3 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC28.15■■■□□ 2.1
HnrnpuQ8VEK3 AC167019.3-201ENSMUST00000228225 1266 ntBASIC28.15■■■□□ 2.1
HnrnpuQ8VEK3 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC28.15■■■□□ 2.1
HnrnpuQ8VEK3 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
HnrnpuQ8VEK3 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
HnrnpuQ8VEK3 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
HnrnpuQ8VEK3 AC122317.2-201ENSMUST00000218708 1248 ntBASIC28.14■■■□□ 2.1
HnrnpuQ8VEK3 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC28.14■■■□□ 2.1
HnrnpuQ8VEK3 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC28.14■■■□□ 2.1
HnrnpuQ8VEK3 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC28.14■■■□□ 2.1
HnrnpuQ8VEK3 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC28.14■■■□□ 2.1
HnrnpuQ8VEK3 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC28.14■■■□□ 2.1
HnrnpuQ8VEK3 Il17rd-202ENSMUST00000223942 2186 ntBASIC28.14■■■□□ 2.09
HnrnpuQ8VEK3 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
HnrnpuQ8VEK3 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC28.13■■■□□ 2.09
HnrnpuQ8VEK3 AC153911.1-201ENSMUST00000220378 758 ntBASIC28.13■■■□□ 2.09
HnrnpuQ8VEK3 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
HnrnpuQ8VEK3 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
HnrnpuQ8VEK3 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC28.13■■■□□ 2.09
HnrnpuQ8VEK3 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC28.12■■■□□ 2.09
HnrnpuQ8VEK3 Gm45364-201ENSMUST00000210883 159 ntBASIC28.12■■■□□ 2.09
HnrnpuQ8VEK3 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
HnrnpuQ8VEK3 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC28.11■■■□□ 2.09
HnrnpuQ8VEK3 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
HnrnpuQ8VEK3 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC28.1■■■□□ 2.09
HnrnpuQ8VEK3 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC28.1■■■□□ 2.09
HnrnpuQ8VEK3 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
HnrnpuQ8VEK3 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC28.1■■■□□ 2.09
HnrnpuQ8VEK3 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC28.1■■■□□ 2.09
HnrnpuQ8VEK3 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC28.1■■■□□ 2.09
HnrnpuQ8VEK3 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
HnrnpuQ8VEK3 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
HnrnpuQ8VEK3 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC28.09■■■□□ 2.09
HnrnpuQ8VEK3 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC28.09■■■□□ 2.09
HnrnpuQ8VEK3 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
HnrnpuQ8VEK3 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
HnrnpuQ8VEK3 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
HnrnpuQ8VEK3 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC28.06■■■□□ 2.08
HnrnpuQ8VEK3 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
HnrnpuQ8VEK3 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
HnrnpuQ8VEK3 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
HnrnpuQ8VEK3 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC28.06■■■□□ 2.08
HnrnpuQ8VEK3 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
HnrnpuQ8VEK3 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
HnrnpuQ8VEK3 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC28.04■■■□□ 2.08
HnrnpuQ8VEK3 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC28.04■■■□□ 2.08
HnrnpuQ8VEK3 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
HnrnpuQ8VEK3 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC28.03■■■□□ 2.08
HnrnpuQ8VEK3 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
HnrnpuQ8VEK3 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms