Protein–RNA interactions for Protein: Q8R4I4

Gtf2a1l, TFIIA-alpha and beta-like factor, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2a1lQ8R4I4 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Gtf2a1lQ8R4I4 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.13
Gtf2a1lQ8R4I4 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Gtf2a1lQ8R4I4 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
Gtf2a1lQ8R4I4 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Gtf2a1lQ8R4I4 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
Gtf2a1lQ8R4I4 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Gtf2a1lQ8R4I4 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
Gtf2a1lQ8R4I4 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Gtf2a1lQ8R4I4 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Gtf2a1lQ8R4I4 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Gtf2a1lQ8R4I4 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Gtf2a1lQ8R4I4 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Gtf2a1lQ8R4I4 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Gtf2a1lQ8R4I4 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
Gtf2a1lQ8R4I4 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Gtf2a1lQ8R4I4 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Gtf2a1lQ8R4I4 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Gtf2a1lQ8R4I4 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Gtf2a1lQ8R4I4 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Gtf2a1lQ8R4I4 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
Gtf2a1lQ8R4I4 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Gtf2a1lQ8R4I4 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC22.03■■□□□ 1.12
Gtf2a1lQ8R4I4 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Gtf2a1lQ8R4I4 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Gtf2a1lQ8R4I4 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Gtf2a1lQ8R4I4 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
Gtf2a1lQ8R4I4 AC167019.3-201ENSMUST00000228225 1266 ntBASIC22.02■■□□□ 1.12
Gtf2a1lQ8R4I4 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
Gtf2a1lQ8R4I4 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
Gtf2a1lQ8R4I4 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
Gtf2a1lQ8R4I4 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Gtf2a1lQ8R4I4 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC22.01■■□□□ 1.11
Gtf2a1lQ8R4I4 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Gtf2a1lQ8R4I4 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Gtf2a1lQ8R4I4 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
Gtf2a1lQ8R4I4 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
Gtf2a1lQ8R4I4 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC22■■□□□ 1.11
Gtf2a1lQ8R4I4 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC22■■□□□ 1.11
Gtf2a1lQ8R4I4 Gm6311-201ENSMUST00000073790 878 ntBASIC22■■□□□ 1.11
Gtf2a1lQ8R4I4 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Gtf2a1lQ8R4I4 Gm4419-202ENSMUST00000226239 1431 ntBASIC21.99■■□□□ 1.11
Gtf2a1lQ8R4I4 Gm37136-201ENSMUST00000194368 194 ntBASIC21.99■■□□□ 1.11
Gtf2a1lQ8R4I4 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Gtf2a1lQ8R4I4 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
Gtf2a1lQ8R4I4 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Gtf2a1lQ8R4I4 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
Gtf2a1lQ8R4I4 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Gtf2a1lQ8R4I4 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Gtf2a1lQ8R4I4 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
Gtf2a1lQ8R4I4 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Gtf2a1lQ8R4I4 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
Gtf2a1lQ8R4I4 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Gtf2a1lQ8R4I4 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Gtf2a1lQ8R4I4 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Gtf2a1lQ8R4I4 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Gtf2a1lQ8R4I4 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
Gtf2a1lQ8R4I4 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC21.94■■□□□ 1.1
Gtf2a1lQ8R4I4 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Gtf2a1lQ8R4I4 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Gtf2a1lQ8R4I4 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Gtf2a1lQ8R4I4 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Gtf2a1lQ8R4I4 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Gtf2a1lQ8R4I4 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
Gtf2a1lQ8R4I4 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Gtf2a1lQ8R4I4 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC21.92■■□□□ 1.1
Gtf2a1lQ8R4I4 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Gtf2a1lQ8R4I4 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
Gtf2a1lQ8R4I4 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Gtf2a1lQ8R4I4 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
Gtf2a1lQ8R4I4 Gm11175-201ENSMUST00000116172 543 ntBASIC21.91■■□□□ 1.1
Gtf2a1lQ8R4I4 Mir6538-201ENSMUST00000183713 110 ntBASIC21.91■■□□□ 1.1
Gtf2a1lQ8R4I4 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Gtf2a1lQ8R4I4 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Gtf2a1lQ8R4I4 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Gtf2a1lQ8R4I4 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Gtf2a1lQ8R4I4 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Gtf2a1lQ8R4I4 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
Gtf2a1lQ8R4I4 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Gtf2a1lQ8R4I4 Gm42699-201ENSMUST00000198104 1657 ntBASIC21.89■■□□□ 1.1
Gtf2a1lQ8R4I4 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC21.89■■□□□ 1.09
Gtf2a1lQ8R4I4 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Gtf2a1lQ8R4I4 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Gtf2a1lQ8R4I4 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Gtf2a1lQ8R4I4 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Gtf2a1lQ8R4I4 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC21.88■■□□□ 1.09
Gtf2a1lQ8R4I4 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC21.88■■□□□ 1.09
Gtf2a1lQ8R4I4 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Gtf2a1lQ8R4I4 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.88■■□□□ 1.09
Gtf2a1lQ8R4I4 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Gtf2a1lQ8R4I4 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.87■■□□□ 1.09
Gtf2a1lQ8R4I4 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC21.87■■□□□ 1.09
Gtf2a1lQ8R4I4 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
Gtf2a1lQ8R4I4 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Gtf2a1lQ8R4I4 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Gtf2a1lQ8R4I4 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC21.86■■□□□ 1.09
Gtf2a1lQ8R4I4 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Gtf2a1lQ8R4I4 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Gtf2a1lQ8R4I4 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Gtf2a1lQ8R4I4 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms