Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
Atf7Q8R0S1 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC26.95■■□□□ 1.9
Atf7Q8R0S1 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC26.94■■□□□ 1.9
Atf7Q8R0S1 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Atf7Q8R0S1 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC26.94■■□□□ 1.9
Atf7Q8R0S1 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Atf7Q8R0S1 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC26.93■■□□□ 1.9
Atf7Q8R0S1 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC26.93■■□□□ 1.9
Atf7Q8R0S1 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
Atf7Q8R0S1 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC26.92■■□□□ 1.9
Atf7Q8R0S1 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Atf7Q8R0S1 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC26.91■■□□□ 1.9
Atf7Q8R0S1 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Atf7Q8R0S1 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC26.9■■□□□ 1.9
Atf7Q8R0S1 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
Atf7Q8R0S1 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
Atf7Q8R0S1 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Atf7Q8R0S1 Il17rd-202ENSMUST00000223942 2186 ntBASIC26.89■■□□□ 1.9
Atf7Q8R0S1 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC26.89■■□□□ 1.89
Atf7Q8R0S1 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC26.88■■□□□ 1.89
Atf7Q8R0S1 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Atf7Q8R0S1 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC26.88■■□□□ 1.89
Atf7Q8R0S1 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Atf7Q8R0S1 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
Atf7Q8R0S1 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Atf7Q8R0S1 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Atf7Q8R0S1 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Atf7Q8R0S1 Mir3960-201ENSMUST00000198213 73 ntBASIC26.87■■□□□ 1.89
Atf7Q8R0S1 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC26.87■■□□□ 1.89
Atf7Q8R0S1 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC26.87■■□□□ 1.89
Atf7Q8R0S1 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC26.86■■□□□ 1.89
Atf7Q8R0S1 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC26.86■■□□□ 1.89
Atf7Q8R0S1 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Atf7Q8R0S1 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC26.85■■□□□ 1.89
Atf7Q8R0S1 AC154454.1-201ENSMUST00000225253 216 ntBASIC26.85■■□□□ 1.89
Atf7Q8R0S1 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Atf7Q8R0S1 Gm9812-201ENSMUST00000061934 968 ntBASIC26.85■■□□□ 1.89
Atf7Q8R0S1 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
Atf7Q8R0S1 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC26.85■■□□□ 1.89
Atf7Q8R0S1 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC26.85■■□□□ 1.89
Atf7Q8R0S1 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC26.85■■□□□ 1.89
Atf7Q8R0S1 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
Atf7Q8R0S1 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC26.84■■□□□ 1.89
Atf7Q8R0S1 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC26.84■■□□□ 1.89
Atf7Q8R0S1 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC26.83■■□□□ 1.89
Atf7Q8R0S1 Gm12818-201ENSMUST00000117562 1349 ntBASIC26.82■■□□□ 1.88
Atf7Q8R0S1 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Atf7Q8R0S1 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC26.81■■□□□ 1.88
Atf7Q8R0S1 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC26.81■■□□□ 1.88
Atf7Q8R0S1 Gm45364-201ENSMUST00000210883 159 ntBASIC26.81■■□□□ 1.88
Atf7Q8R0S1 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC26.81■■□□□ 1.88
Atf7Q8R0S1 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Atf7Q8R0S1 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Atf7Q8R0S1 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC26.81■■□□□ 1.88
Atf7Q8R0S1 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Atf7Q8R0S1 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC26.8■■□□□ 1.88
Atf7Q8R0S1 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Atf7Q8R0S1 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC26.8■■□□□ 1.88
Atf7Q8R0S1 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Atf7Q8R0S1 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC26.79■■□□□ 1.88
Atf7Q8R0S1 AC122317.2-201ENSMUST00000218708 1248 ntBASIC26.79■■□□□ 1.88
Atf7Q8R0S1 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
Atf7Q8R0S1 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC26.78■■□□□ 1.88
Atf7Q8R0S1 AC167019.3-201ENSMUST00000228225 1266 ntBASIC26.78■■□□□ 1.88
Atf7Q8R0S1 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC26.78■■□□□ 1.88
Atf7Q8R0S1 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC26.77■■□□□ 1.88
Atf7Q8R0S1 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC26.77■■□□□ 1.88
Atf7Q8R0S1 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC26.77■■□□□ 1.88
Atf7Q8R0S1 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
Atf7Q8R0S1 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC26.76■■□□□ 1.87
Atf7Q8R0S1 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Atf7Q8R0S1 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC26.75■■□□□ 1.87
Atf7Q8R0S1 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC26.74■■□□□ 1.87
Atf7Q8R0S1 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Atf7Q8R0S1 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC26.74■■□□□ 1.87
Atf7Q8R0S1 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC26.74■■□□□ 1.87
Atf7Q8R0S1 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
Atf7Q8R0S1 AC153911.1-201ENSMUST00000220378 758 ntBASIC26.73■■□□□ 1.87
Atf7Q8R0S1 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Atf7Q8R0S1 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Atf7Q8R0S1 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Atf7Q8R0S1 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Atf7Q8R0S1 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Atf7Q8R0S1 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Atf7Q8R0S1 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Atf7Q8R0S1 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
Atf7Q8R0S1 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
Atf7Q8R0S1 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
Atf7Q8R0S1 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC26.71■■□□□ 1.87
Atf7Q8R0S1 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC26.71■■□□□ 1.87
Atf7Q8R0S1 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
Atf7Q8R0S1 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC26.7■■□□□ 1.87
Atf7Q8R0S1 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Atf7Q8R0S1 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Atf7Q8R0S1 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Atf7Q8R0S1 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
Atf7Q8R0S1 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC26.67■■□□□ 1.86
Atf7Q8R0S1 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC26.67■■□□□ 1.86
Atf7Q8R0S1 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC26.66■■□□□ 1.86
Atf7Q8R0S1 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms