Protein–RNA interactions for Protein: Q8K1J6

Trnt1, CCA tRNA nucleotidyltransferase 1, mitochondrial, mousemouse

Predictions only

Length 434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnt1Q8K1J6 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Trnt1Q8K1J6 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Trnt1Q8K1J6 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC22■■□□□ 1.11
Trnt1Q8K1J6 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
Trnt1Q8K1J6 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC22■■□□□ 1.11
Trnt1Q8K1J6 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC22■■□□□ 1.11
Trnt1Q8K1J6 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Trnt1Q8K1J6 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Trnt1Q8K1J6 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Trnt1Q8K1J6 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
Trnt1Q8K1J6 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Trnt1Q8K1J6 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trnt1Q8K1J6 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trnt1Q8K1J6 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Trnt1Q8K1J6 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Trnt1Q8K1J6 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
Trnt1Q8K1J6 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.95■■□□□ 1.11
Trnt1Q8K1J6 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
Trnt1Q8K1J6 Mir3960-201ENSMUST00000198213 73 ntBASIC21.95■■□□□ 1.1
Trnt1Q8K1J6 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Trnt1Q8K1J6 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Trnt1Q8K1J6 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Trnt1Q8K1J6 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Trnt1Q8K1J6 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Trnt1Q8K1J6 AC154454.1-201ENSMUST00000225253 216 ntBASIC21.94■■□□□ 1.1
Trnt1Q8K1J6 Gm9812-201ENSMUST00000061934 968 ntBASIC21.94■■□□□ 1.1
Trnt1Q8K1J6 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Trnt1Q8K1J6 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Trnt1Q8K1J6 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Trnt1Q8K1J6 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Trnt1Q8K1J6 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
Trnt1Q8K1J6 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trnt1Q8K1J6 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trnt1Q8K1J6 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trnt1Q8K1J6 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trnt1Q8K1J6 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trnt1Q8K1J6 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Trnt1Q8K1J6 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Trnt1Q8K1J6 Gm12818-201ENSMUST00000117562 1349 ntBASIC21.91■■□□□ 1.1
Trnt1Q8K1J6 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Trnt1Q8K1J6 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
Trnt1Q8K1J6 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Trnt1Q8K1J6 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Trnt1Q8K1J6 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
Trnt1Q8K1J6 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trnt1Q8K1J6 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trnt1Q8K1J6 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
Trnt1Q8K1J6 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trnt1Q8K1J6 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Trnt1Q8K1J6 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trnt1Q8K1J6 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC21.89■■□□□ 1.1
Trnt1Q8K1J6 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Trnt1Q8K1J6 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Trnt1Q8K1J6 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Trnt1Q8K1J6 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC21.88■■□□□ 1.09
Trnt1Q8K1J6 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Trnt1Q8K1J6 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Trnt1Q8K1J6 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.88■■□□□ 1.09
Trnt1Q8K1J6 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC21.87■■□□□ 1.09
Trnt1Q8K1J6 Gm45364-201ENSMUST00000210883 159 ntBASIC21.87■■□□□ 1.09
Trnt1Q8K1J6 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
Trnt1Q8K1J6 AC122317.2-201ENSMUST00000218708 1248 ntBASIC21.87■■□□□ 1.09
Trnt1Q8K1J6 AC167019.3-201ENSMUST00000228225 1266 ntBASIC21.87■■□□□ 1.09
Trnt1Q8K1J6 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Trnt1Q8K1J6 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.87■■□□□ 1.09
Trnt1Q8K1J6 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.87■■□□□ 1.09
Trnt1Q8K1J6 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Trnt1Q8K1J6 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Trnt1Q8K1J6 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
Trnt1Q8K1J6 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Trnt1Q8K1J6 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC21.86■■□□□ 1.09
Trnt1Q8K1J6 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Trnt1Q8K1J6 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
Trnt1Q8K1J6 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC21.85■■□□□ 1.09
Trnt1Q8K1J6 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Trnt1Q8K1J6 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.85■■□□□ 1.09
Trnt1Q8K1J6 AC153911.1-201ENSMUST00000220378 758 ntBASIC21.85■■□□□ 1.09
Trnt1Q8K1J6 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Trnt1Q8K1J6 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Trnt1Q8K1J6 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
Trnt1Q8K1J6 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.83■■□□□ 1.09
Trnt1Q8K1J6 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Trnt1Q8K1J6 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Trnt1Q8K1J6 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Trnt1Q8K1J6 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Trnt1Q8K1J6 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Trnt1Q8K1J6 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Trnt1Q8K1J6 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Trnt1Q8K1J6 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.82■■□□□ 1.08
Trnt1Q8K1J6 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Trnt1Q8K1J6 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC21.8■■□□□ 1.08
Trnt1Q8K1J6 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Trnt1Q8K1J6 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Trnt1Q8K1J6 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Trnt1Q8K1J6 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Trnt1Q8K1J6 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC21.79■■□□□ 1.08
Trnt1Q8K1J6 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Trnt1Q8K1J6 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Trnt1Q8K1J6 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Trnt1Q8K1J6 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms