Protein–RNA interactions for Protein: Q8CIG0

Depdc1a, DEP domain-containing protein 1A, mousemouse

Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1aQ8CIG0 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC26.04■■□□□ 1.76
Depdc1aQ8CIG0 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Depdc1aQ8CIG0 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Depdc1aQ8CIG0 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
Depdc1aQ8CIG0 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Depdc1aQ8CIG0 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Depdc1aQ8CIG0 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Depdc1aQ8CIG0 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC26.03■■□□□ 1.76
Depdc1aQ8CIG0 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC26.02■■□□□ 1.76
Depdc1aQ8CIG0 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Depdc1aQ8CIG0 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Depdc1aQ8CIG0 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Depdc1aQ8CIG0 Gm14523-201ENSMUST00000117260 558 ntBASIC26.01■■□□□ 1.75
Depdc1aQ8CIG0 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC26.01■■□□□ 1.75
Depdc1aQ8CIG0 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
Depdc1aQ8CIG0 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC26.01■■□□□ 1.75
Depdc1aQ8CIG0 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC26■■□□□ 1.75
Depdc1aQ8CIG0 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Depdc1aQ8CIG0 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC26■■□□□ 1.75
Depdc1aQ8CIG0 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC26■■□□□ 1.75
Depdc1aQ8CIG0 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC26■■□□□ 1.75
Depdc1aQ8CIG0 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Depdc1aQ8CIG0 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Depdc1aQ8CIG0 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Depdc1aQ8CIG0 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC25.99■■□□□ 1.75
Depdc1aQ8CIG0 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC25.99■■□□□ 1.75
Depdc1aQ8CIG0 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Depdc1aQ8CIG0 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Depdc1aQ8CIG0 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
Depdc1aQ8CIG0 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
Depdc1aQ8CIG0 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Depdc1aQ8CIG0 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Depdc1aQ8CIG0 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
Depdc1aQ8CIG0 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
Depdc1aQ8CIG0 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Depdc1aQ8CIG0 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Depdc1aQ8CIG0 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC25.96■■□□□ 1.75
Depdc1aQ8CIG0 Gm7332-201ENSMUST00000118351 454 ntBASIC25.96■■□□□ 1.75
Depdc1aQ8CIG0 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC25.95■■□□□ 1.75
Depdc1aQ8CIG0 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
Depdc1aQ8CIG0 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
Depdc1aQ8CIG0 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
Depdc1aQ8CIG0 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC25.94■■□□□ 1.74
Depdc1aQ8CIG0 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
Depdc1aQ8CIG0 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Depdc1aQ8CIG0 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
Depdc1aQ8CIG0 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC25.93■■□□□ 1.74
Depdc1aQ8CIG0 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC25.93■■□□□ 1.74
Depdc1aQ8CIG0 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Depdc1aQ8CIG0 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
Depdc1aQ8CIG0 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC25.92■■□□□ 1.74
Depdc1aQ8CIG0 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
Depdc1aQ8CIG0 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC25.92■■□□□ 1.74
Depdc1aQ8CIG0 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC25.91■■□□□ 1.74
Depdc1aQ8CIG0 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC25.91■■□□□ 1.74
Depdc1aQ8CIG0 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Depdc1aQ8CIG0 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Depdc1aQ8CIG0 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
Depdc1aQ8CIG0 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC25.9■■□□□ 1.74
Depdc1aQ8CIG0 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC25.89■■□□□ 1.74
Depdc1aQ8CIG0 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC25.89■■□□□ 1.74
Depdc1aQ8CIG0 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC25.89■■□□□ 1.73
Depdc1aQ8CIG0 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC25.88■■□□□ 1.73
Depdc1aQ8CIG0 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Depdc1aQ8CIG0 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC25.88■■□□□ 1.73
Depdc1aQ8CIG0 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC25.88■■□□□ 1.73
Depdc1aQ8CIG0 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Depdc1aQ8CIG0 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC25.87■■□□□ 1.73
Depdc1aQ8CIG0 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Depdc1aQ8CIG0 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC25.86■■□□□ 1.73
Depdc1aQ8CIG0 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC25.86■■□□□ 1.73
Depdc1aQ8CIG0 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC25.85■■□□□ 1.73
Depdc1aQ8CIG0 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
Depdc1aQ8CIG0 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Depdc1aQ8CIG0 Gm44428-201ENSMUST00000204474 874 ntBASIC25.84■■□□□ 1.73
Depdc1aQ8CIG0 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC25.84■■□□□ 1.73
Depdc1aQ8CIG0 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Depdc1aQ8CIG0 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC25.84■■□□□ 1.73
Depdc1aQ8CIG0 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC25.84■■□□□ 1.73
Depdc1aQ8CIG0 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC25.83■■□□□ 1.73
Depdc1aQ8CIG0 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Depdc1aQ8CIG0 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC25.83■■□□□ 1.73
Depdc1aQ8CIG0 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC25.82■■□□□ 1.72
Depdc1aQ8CIG0 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Depdc1aQ8CIG0 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Depdc1aQ8CIG0 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC25.81■■□□□ 1.72
Depdc1aQ8CIG0 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC25.81■■□□□ 1.72
Depdc1aQ8CIG0 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC25.8■■□□□ 1.72
Depdc1aQ8CIG0 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC25.8■■□□□ 1.72
Depdc1aQ8CIG0 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
Depdc1aQ8CIG0 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC25.79■■□□□ 1.72
Depdc1aQ8CIG0 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC25.79■■□□□ 1.72
Depdc1aQ8CIG0 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC25.79■■□□□ 1.72
Depdc1aQ8CIG0 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC25.78■■□□□ 1.72
Depdc1aQ8CIG0 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC25.78■■□□□ 1.72
Depdc1aQ8CIG0 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Depdc1aQ8CIG0 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Depdc1aQ8CIG0 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC25.78■■□□□ 1.72
Depdc1aQ8CIG0 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
Depdc1aQ8CIG0 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms