Protein–RNA interactions for Protein: Q8BYM7

Rsph4a, Radial spoke head protein 4 homolog A, mousemouse

Predictions only

Length 716 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph4aQ8BYM7 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC33.43■■■□□ 2.94
Rsph4aQ8BYM7 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC33.43■■■□□ 2.94
Rsph4aQ8BYM7 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC33.43■■■□□ 2.94
Rsph4aQ8BYM7 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC33.42■■■□□ 2.94
Rsph4aQ8BYM7 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC33.42■■■□□ 2.94
Rsph4aQ8BYM7 Gm37847-201ENSMUST00000192163 1497 ntBASIC33.42■■■□□ 2.94
Rsph4aQ8BYM7 Gm31748-201ENSMUST00000194938 1497 ntBASIC33.42■■■□□ 2.94
Rsph4aQ8BYM7 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC33.41■■■□□ 2.94
Rsph4aQ8BYM7 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC33.4■■■□□ 2.94
Rsph4aQ8BYM7 Gm13238-201ENSMUST00000117655 780 ntBASIC33.4■■■□□ 2.94
Rsph4aQ8BYM7 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC33.4■■■□□ 2.94
Rsph4aQ8BYM7 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC33.4■■■□□ 2.94
Rsph4aQ8BYM7 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC33.4■■■□□ 2.94
Rsph4aQ8BYM7 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC33.39■■■□□ 2.94
Rsph4aQ8BYM7 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC33.39■■■□□ 2.94
Rsph4aQ8BYM7 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC33.38■■■□□ 2.93
Rsph4aQ8BYM7 Gm15820-201ENSMUST00000201566 728 ntBASIC33.38■■■□□ 2.93
Rsph4aQ8BYM7 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC33.38■■■□□ 2.93
Rsph4aQ8BYM7 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC33.38■■■□□ 2.93
Rsph4aQ8BYM7 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC33.36■■■□□ 2.93
Rsph4aQ8BYM7 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC33.36■■■□□ 2.93
Rsph4aQ8BYM7 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC33.36■■■□□ 2.93
Rsph4aQ8BYM7 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC33.36■■■□□ 2.93
Rsph4aQ8BYM7 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC33.35■■■□□ 2.93
Rsph4aQ8BYM7 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC33.33■■■□□ 2.93
Rsph4aQ8BYM7 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC33.33■■■□□ 2.93
Rsph4aQ8BYM7 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC33.33■■■□□ 2.93
Rsph4aQ8BYM7 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC33.33■■■□□ 2.93
Rsph4aQ8BYM7 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC33.32■■■□□ 2.92
Rsph4aQ8BYM7 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC33.32■■■□□ 2.92
Rsph4aQ8BYM7 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC33.32■■■□□ 2.92
Rsph4aQ8BYM7 Gm42501-201ENSMUST00000200220 1026 ntBASIC33.32■■■□□ 2.92
Rsph4aQ8BYM7 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC33.32■■■□□ 2.92
Rsph4aQ8BYM7 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC33.32■■■□□ 2.92
Rsph4aQ8BYM7 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC33.31■■■□□ 2.92
Rsph4aQ8BYM7 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC33.31■■■□□ 2.92
Rsph4aQ8BYM7 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC33.31■■■□□ 2.92
Rsph4aQ8BYM7 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC33.31■■■□□ 2.92
Rsph4aQ8BYM7 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC33.3■■■□□ 2.92
Rsph4aQ8BYM7 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC33.3■■■□□ 2.92
Rsph4aQ8BYM7 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC33.3■■■□□ 2.92
Rsph4aQ8BYM7 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC33.29■■■□□ 2.92
Rsph4aQ8BYM7 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC33.29■■■□□ 2.92
Rsph4aQ8BYM7 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC33.28■■■□□ 2.92
Rsph4aQ8BYM7 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC33.28■■■□□ 2.92
Rsph4aQ8BYM7 AC117769.4-201ENSMUST00000225679 685 ntBASIC33.27■■■□□ 2.92
Rsph4aQ8BYM7 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC33.27■■■□□ 2.92
Rsph4aQ8BYM7 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC33.26■■■□□ 2.92
Rsph4aQ8BYM7 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC33.26■■■□□ 2.91
Rsph4aQ8BYM7 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC33.26■■■□□ 2.91
Rsph4aQ8BYM7 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC33.26■■■□□ 2.91
Rsph4aQ8BYM7 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC33.26■■■□□ 2.91
Rsph4aQ8BYM7 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC33.25■■■□□ 2.91
Rsph4aQ8BYM7 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC33.25■■■□□ 2.91
Rsph4aQ8BYM7 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC33.24■■■□□ 2.91
Rsph4aQ8BYM7 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC33.24■■■□□ 2.91
Rsph4aQ8BYM7 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC33.24■■■□□ 2.91
Rsph4aQ8BYM7 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC33.23■■■□□ 2.91
Rsph4aQ8BYM7 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
Rsph4aQ8BYM7 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC33.22■■■□□ 2.91
Rsph4aQ8BYM7 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC33.22■■■□□ 2.91
Rsph4aQ8BYM7 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC33.22■■■□□ 2.91
Rsph4aQ8BYM7 Zxda-201ENSMUST00000117281 2621 ntBASIC33.22■■■□□ 2.91
Rsph4aQ8BYM7 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC33.22■■■□□ 2.91
Rsph4aQ8BYM7 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC33.21■■■□□ 2.91
Rsph4aQ8BYM7 Gm18755-201ENSMUST00000218030 1099 ntBASIC33.21■■■□□ 2.91
Rsph4aQ8BYM7 Gm4419-202ENSMUST00000226239 1431 ntBASIC33.2■■■□□ 2.91
Rsph4aQ8BYM7 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC33.2■■■□□ 2.91
Rsph4aQ8BYM7 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC33.19■■■□□ 2.9
Rsph4aQ8BYM7 Gm14117-201ENSMUST00000122417 843 ntBASIC33.19■■■□□ 2.9
Rsph4aQ8BYM7 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC33.19■■■□□ 2.9
Rsph4aQ8BYM7 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC33.19■■■□□ 2.9
Rsph4aQ8BYM7 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.9
Rsph4aQ8BYM7 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC33.18■■■□□ 2.9
Rsph4aQ8BYM7 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC33.17■■■□□ 2.9
Rsph4aQ8BYM7 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC33.15■■■□□ 2.9
Rsph4aQ8BYM7 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.9
Rsph4aQ8BYM7 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC33.14■■■□□ 2.9
Rsph4aQ8BYM7 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC33.13■■■□□ 2.89
Rsph4aQ8BYM7 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC33.13■■■□□ 2.89
Rsph4aQ8BYM7 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC33.13■■■□□ 2.89
Rsph4aQ8BYM7 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC33.13■■■□□ 2.89
Rsph4aQ8BYM7 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
Rsph4aQ8BYM7 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC33.11■■■□□ 2.89
Rsph4aQ8BYM7 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC33.11■■■□□ 2.89
Rsph4aQ8BYM7 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
Rsph4aQ8BYM7 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC33.1■■■□□ 2.89
Rsph4aQ8BYM7 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
Rsph4aQ8BYM7 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC33.1■■■□□ 2.89
Rsph4aQ8BYM7 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
Rsph4aQ8BYM7 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
Rsph4aQ8BYM7 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC33.09■■■□□ 2.89
Rsph4aQ8BYM7 Gm9959-201ENSMUST00000068277 390 ntBASIC33.09■■■□□ 2.89
Rsph4aQ8BYM7 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
Rsph4aQ8BYM7 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC33.08■■■□□ 2.89
Rsph4aQ8BYM7 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC33.08■■■□□ 2.89
Rsph4aQ8BYM7 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC33.08■■■□□ 2.89
Rsph4aQ8BYM7 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC33.08■■■□□ 2.89
Rsph4aQ8BYM7 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
Rsph4aQ8BYM7 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
Retrieved 100 of 76,532 protein–RNA pairs in 69 ms