Protein–RNA interactions for Protein: Q8BUE1

Slc9a4, Sodium/hydrogen exchanger 4, mousemouse

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc9a4Q8BUE1 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Slc9a4Q8BUE1 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Slc9a4Q8BUE1 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Slc9a4Q8BUE1 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Slc9a4Q8BUE1 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Slc9a4Q8BUE1 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Slc9a4Q8BUE1 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Slc9a4Q8BUE1 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Slc9a4Q8BUE1 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Slc9a4Q8BUE1 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Slc9a4Q8BUE1 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Slc9a4Q8BUE1 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Slc9a4Q8BUE1 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC23.87■■□□□ 1.41
Slc9a4Q8BUE1 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Slc9a4Q8BUE1 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Slc9a4Q8BUE1 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Slc9a4Q8BUE1 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC23.86■■□□□ 1.41
Slc9a4Q8BUE1 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Slc9a4Q8BUE1 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Slc9a4Q8BUE1 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Slc9a4Q8BUE1 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Slc9a4Q8BUE1 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Slc9a4Q8BUE1 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Slc9a4Q8BUE1 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC23.84■■□□□ 1.41
Slc9a4Q8BUE1 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Slc9a4Q8BUE1 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Slc9a4Q8BUE1 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Slc9a4Q8BUE1 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Slc9a4Q8BUE1 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Slc9a4Q8BUE1 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Slc9a4Q8BUE1 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
Slc9a4Q8BUE1 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Slc9a4Q8BUE1 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
Slc9a4Q8BUE1 Terc-201ENSMUST00000082862 423 ntBASIC23.81■■□□□ 1.4
Slc9a4Q8BUE1 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC23.81■■□□□ 1.4
Slc9a4Q8BUE1 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC23.8■■□□□ 1.4
Slc9a4Q8BUE1 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC23.8■■□□□ 1.4
Slc9a4Q8BUE1 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC23.8■■□□□ 1.4
Slc9a4Q8BUE1 Gm42699-201ENSMUST00000198104 1657 ntBASIC23.79■■□□□ 1.4
Slc9a4Q8BUE1 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Slc9a4Q8BUE1 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Slc9a4Q8BUE1 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Slc9a4Q8BUE1 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Slc9a4Q8BUE1 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
Slc9a4Q8BUE1 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC23.76■■□□□ 1.39
Slc9a4Q8BUE1 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Slc9a4Q8BUE1 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Slc9a4Q8BUE1 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Slc9a4Q8BUE1 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Slc9a4Q8BUE1 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Slc9a4Q8BUE1 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
Slc9a4Q8BUE1 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Slc9a4Q8BUE1 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Slc9a4Q8BUE1 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Slc9a4Q8BUE1 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Slc9a4Q8BUE1 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Slc9a4Q8BUE1 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Slc9a4Q8BUE1 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
Slc9a4Q8BUE1 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Slc9a4Q8BUE1 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Slc9a4Q8BUE1 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
Slc9a4Q8BUE1 Gm9910-201ENSMUST00000195385 1550 ntBASIC23.74■■□□□ 1.39
Slc9a4Q8BUE1 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
Slc9a4Q8BUE1 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC23.73■■□□□ 1.39
Slc9a4Q8BUE1 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Slc9a4Q8BUE1 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
Slc9a4Q8BUE1 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Slc9a4Q8BUE1 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Slc9a4Q8BUE1 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Slc9a4Q8BUE1 Scarna2-201ENSMUST00000157560 414 ntBASIC23.72■■□□□ 1.39
Slc9a4Q8BUE1 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
Slc9a4Q8BUE1 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Slc9a4Q8BUE1 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC23.71■■□□□ 1.39
Slc9a4Q8BUE1 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Slc9a4Q8BUE1 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC23.71■■□□□ 1.39
Slc9a4Q8BUE1 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Slc9a4Q8BUE1 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Slc9a4Q8BUE1 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Slc9a4Q8BUE1 Gm9806-201ENSMUST00000051080 552 ntBASIC23.7■■□□□ 1.38
Slc9a4Q8BUE1 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
Slc9a4Q8BUE1 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC23.7■■□□□ 1.38
Slc9a4Q8BUE1 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Slc9a4Q8BUE1 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC23.69■■□□□ 1.38
Slc9a4Q8BUE1 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Slc9a4Q8BUE1 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Slc9a4Q8BUE1 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Slc9a4Q8BUE1 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Slc9a4Q8BUE1 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Slc9a4Q8BUE1 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Slc9a4Q8BUE1 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
Slc9a4Q8BUE1 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
Slc9a4Q8BUE1 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Slc9a4Q8BUE1 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Slc9a4Q8BUE1 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Slc9a4Q8BUE1 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Slc9a4Q8BUE1 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC23.67■■□□□ 1.38
Slc9a4Q8BUE1 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Slc9a4Q8BUE1 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Slc9a4Q8BUE1 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Slc9a4Q8BUE1 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
Retrieved 100 of 76,532 protein–RNA pairs in 11.8 ms