Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cdk5rap1Q8BTW8 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cdk5rap1Q8BTW8 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC21.67■■□□□ 1.06
Cdk5rap1Q8BTW8 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cdk5rap1Q8BTW8 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cdk5rap1Q8BTW8 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cdk5rap1Q8BTW8 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Cdk5rap1Q8BTW8 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cdk5rap1Q8BTW8 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Cdk5rap1Q8BTW8 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cdk5rap1Q8BTW8 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC21.66■■□□□ 1.06
Cdk5rap1Q8BTW8 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Cdk5rap1Q8BTW8 Gm14523-201ENSMUST00000117260 558 ntBASIC21.65■■□□□ 1.06
Cdk5rap1Q8BTW8 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cdk5rap1Q8BTW8 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cdk5rap1Q8BTW8 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cdk5rap1Q8BTW8 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Cdk5rap1Q8BTW8 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Cdk5rap1Q8BTW8 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cdk5rap1Q8BTW8 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
Cdk5rap1Q8BTW8 Gm7332-201ENSMUST00000118351 454 ntBASIC21.63■■□□□ 1.05
Cdk5rap1Q8BTW8 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC21.63■■□□□ 1.05
Cdk5rap1Q8BTW8 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cdk5rap1Q8BTW8 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cdk5rap1Q8BTW8 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cdk5rap1Q8BTW8 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cdk5rap1Q8BTW8 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
Cdk5rap1Q8BTW8 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Cdk5rap1Q8BTW8 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cdk5rap1Q8BTW8 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cdk5rap1Q8BTW8 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
Cdk5rap1Q8BTW8 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC21.61■■□□□ 1.05
Cdk5rap1Q8BTW8 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Cdk5rap1Q8BTW8 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cdk5rap1Q8BTW8 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Cdk5rap1Q8BTW8 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC21.59■■□□□ 1.05
Cdk5rap1Q8BTW8 AC151971.4-201ENSMUST00000214717 704 ntBASIC21.59■■□□□ 1.05
Cdk5rap1Q8BTW8 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.59■■□□□ 1.05
Cdk5rap1Q8BTW8 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cdk5rap1Q8BTW8 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC21.58■■□□□ 1.05
Cdk5rap1Q8BTW8 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
Cdk5rap1Q8BTW8 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.58■■□□□ 1.04
Cdk5rap1Q8BTW8 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.04
Cdk5rap1Q8BTW8 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC21.57■■□□□ 1.04
Cdk5rap1Q8BTW8 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Cdk5rap1Q8BTW8 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cdk5rap1Q8BTW8 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC21.56■■□□□ 1.04
Cdk5rap1Q8BTW8 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cdk5rap1Q8BTW8 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Cdk5rap1Q8BTW8 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cdk5rap1Q8BTW8 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cdk5rap1Q8BTW8 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cdk5rap1Q8BTW8 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Cdk5rap1Q8BTW8 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cdk5rap1Q8BTW8 Gm44428-201ENSMUST00000204474 874 ntBASIC21.54■■□□□ 1.04
Cdk5rap1Q8BTW8 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Cdk5rap1Q8BTW8 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cdk5rap1Q8BTW8 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Cdk5rap1Q8BTW8 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC21.53■■□□□ 1.04
Cdk5rap1Q8BTW8 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cdk5rap1Q8BTW8 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
Cdk5rap1Q8BTW8 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cdk5rap1Q8BTW8 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.52■■□□□ 1.04
Cdk5rap1Q8BTW8 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Cdk5rap1Q8BTW8 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cdk5rap1Q8BTW8 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cdk5rap1Q8BTW8 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Cdk5rap1Q8BTW8 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Cdk5rap1Q8BTW8 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC21.51■■□□□ 1.03
Cdk5rap1Q8BTW8 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC21.51■■□□□ 1.03
Cdk5rap1Q8BTW8 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Cdk5rap1Q8BTW8 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC21.51■■□□□ 1.03
Cdk5rap1Q8BTW8 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Cdk5rap1Q8BTW8 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Cdk5rap1Q8BTW8 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cdk5rap1Q8BTW8 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cdk5rap1Q8BTW8 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Cdk5rap1Q8BTW8 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.5■■□□□ 1.03
Cdk5rap1Q8BTW8 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Cdk5rap1Q8BTW8 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Cdk5rap1Q8BTW8 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.49■■□□□ 1.03
Cdk5rap1Q8BTW8 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC21.49■■□□□ 1.03
Cdk5rap1Q8BTW8 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Cdk5rap1Q8BTW8 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cdk5rap1Q8BTW8 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Cdk5rap1Q8BTW8 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Cdk5rap1Q8BTW8 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Cdk5rap1Q8BTW8 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Cdk5rap1Q8BTW8 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC21.47■■□□□ 1.03
Cdk5rap1Q8BTW8 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Cdk5rap1Q8BTW8 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21.46■■□□□ 1.03
Cdk5rap1Q8BTW8 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Cdk5rap1Q8BTW8 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Cdk5rap1Q8BTW8 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Cdk5rap1Q8BTW8 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Cdk5rap1Q8BTW8 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Cdk5rap1Q8BTW8 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Cdk5rap1Q8BTW8 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Cdk5rap1Q8BTW8 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Cdk5rap1Q8BTW8 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC21.45■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms